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CAZyme Information: MGYG000001443_02627

You are here: Home > Sequence: MGYG000001443_02627

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptomyces albus
Lineage Bacteria; Actinobacteriota; Actinomycetia; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albus
CAZyme ID MGYG000001443_02627
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
243 MGYG000001443_5|CGC2 25732.44 8.8893
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001443 7820353 Isolate not provided not provided
Gene Location Start: 188689;  End: 189420  Strand: +

Full Sequence      Download help

MLEGNRVTAR  ISVRGFAVAS  ATAVTTVGAV  VGVAAGADQG  QASDVEATAA  QATLLEDIPA60
GSQAQVQTAS  LTQQAEHASA  AAQAKAKKSA  EEAARKQAAK  DAAAKKEKAE  KEAAAKDAAE120
KAKERDKIKS  ASSRSEERPD  FTQKSSYTTA  EVQSMAKQIV  GADQYQCFSE  IVSRESGWNY180
RATNASSGAY  GLVQALPGSK  MASAGADWRT  NPATQIKWGL  NYMNSRYDSP  CGAWQFWQAN240
HWY243

Enzyme Prediction      help

No EC number prediction in MGYG000001443_02627.

CDD Domains      download full data without filtering help

Created with Snap1224364860728597109121133145157170182194206218230175234SLT171234LT_TF-like171214RPF
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01464 SLT 9.93e-05 175 234 22 85
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
cd13402 LT_TF-like 0.001 171 234 7 79
lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
cd13925 RPF 0.004 171 214 6 48
core lysozyme-like domain of resuscitation-promoting factor proteins. Resuscitation-promoting factor (RPF) proteins, found in various (G+C)-rich Gram-positive bacteria, act to reactivate cultures from stationary phase. This protein shares elements of the structural core of lysozyme and related proteins. Furthermore, it shares a conserved active site glutamate which is required for activity, and has a polysaccharide binding cleft that corresponds to the peptidoglycan binding cleft of lysozyme. Muralytic activity of Rpf in Micrococcus luteus correlates with resuscitation, supporting a mechanism dependent on cleavage of peptidoglycan by RPF.

CAZyme Hits      help

Created with Snap12243648607285971091211331451571701821942062182308243QID37977.1|GH238243QNF55444.1|GH238243QHF97170.1|GH231243QUI33610.1|GH231243AYA17004.1|GH23
Hit ID E-Value Query Start Query End Hit Start Hit End
QID37977.1 5.65e-122 8 243 2 237
QNF55444.1 1.63e-89 8 243 2 242
QHF97170.1 1.63e-89 8 243 2 242
QUI33610.1 1.01e-84 1 243 1 248
AYA17004.1 1.11e-84 1 243 4 251

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.495235 0.409168 0.071540 0.015921 0.006319 0.001807

TMHMM  Annotations      download full data without filtering help

start end
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