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CAZyme Information: MGYG000001403_00622

You are here: Home > Sequence: MGYG000001403_00622

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Oceanobacillus massiliensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Oceanobacillus; Oceanobacillus massiliensis
CAZyme ID MGYG000001403_00622
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
714 MGYG000001403_1|CGC7 78835.5 6.8238
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001403 3539155 Isolate not provided not provided
Gene Location Start: 657053;  End: 659197  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001403_00622.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 403 539 2.4e-19 0.953125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 9.79e-71 315 557 15 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 3.64e-24 391 548 1 146
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
COG3103 YgiM 3.36e-10 563 703 15 146
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
pfam08239 SH3_3 4.81e-10 593 641 2 53
Bacterial SH3 domain.
pfam07653 SH3_2 3.37e-05 611 641 21 51
Variant SH3 domain. SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQI62956.1 2.15e-252 1 714 1 802
QHS23523.1 1.09e-231 40 706 251 915
QTN00811.1 1.79e-221 38 707 316 981
VEF49624.1 5.06e-218 8 714 13 798
AZV45293.1 1.66e-174 15 557 9 549

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 5.22e-53 334 558 29 244
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 1.62e-40 337 542 71 260
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXP_A 1.85e-40 337 542 41 230
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 1.56e-39 343 542 29 212
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 1.03e-38 343 542 29 212
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 2.45e-61 346 557 678 879
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q99V41 3.19e-47 334 558 1033 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q931U5 3.19e-47 334 558 1033 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
P0C5Z8 3.20e-47 334 558 1040 1255
Bifunctional autolysin OS=Staphylococcus aureus OX=1280 GN=atl PE=1 SV=1
A7X0T9 3.20e-47 334 558 1040 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001319 0.997804 0.000243 0.000228 0.000196 0.000184

TMHMM  Annotations      download full data without filtering help

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