CAZyme Information: MGYG000001400_01466

Basic Information

• Species: Erysipelatoclostridium ramosum
• Lineage: Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelatoclostridiaceae; Erysipelatoclostridium; Erysipelatoclostridium ramosum
• CAZyme ID: MGYG000001400_01466
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1092		118879.79	4.5943

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001400	3785853	Isolate	not provided	not provided

• Gene Location: Start: 1509963; End: 1513241 Strand: -

Full Sequence      

MKRLGKRRIISLIMALSMAVTTVFSANISNVRALTNAEKARELVSKMTLEEKIGQKLMLS
FRSGWTMRDGTKISSVQTINDEIHEIIGEYDIGSVILFAANFNSDAKVNVELTDGLQKAA
MDKDLGKNSIPLLIATDQEGGIVYRLTGGTALPGNMALGASGNTENAVKAGNIIGSELNA
VGVNVNFAPDADVNNNPNNPVIGLRSFSSNPQLAAKFVSAYIEGVQSNNVATAAKHFPGH
GNVATDSHTGLPSVPATKEELYKTELVPFQAAIDAGTDMVMTAHIQFPNIVTEEIYSDKK
DELMSPPATLSREILTDLLRDEMKFDGVIVTDSMTMQGVANYFDTNERNLLAVKAGVDIL
DIPFTDISSMKDMESKLIPLINAFVDAYTKEDGYNGIKLSLEELDKSVERILVCKYNRDV
MDLANDTTTLDDKKAIASKVVGSVENRETERLISANAVTVVKNENNVLPLKLTKDSKVVF
ASTYSRNNNRFILAWQRAKQAGIIPEGADYKILQHYNWTGLNDKVNSAINSDGTNFVGTN
KDVLDWGTVLVHASEISSASGIDGYLVACPQLFTKYCKENGKQTVVISLNHPYDVQAFPD
ADGILAVYGTTSLGLDITESFGGGTVGATAAFSPNLTAGTEVALGTFGASGKLPVDIPKY
VPKSGVYSTDENVYELGYGIEYDAIAKDPDKKGLADAIAQAKAIDKSVYTTESWEAAAEA
LNTLKVVLQTAENVNLTHKLAQSVVDENETDLRDKYNTVLSLLVYKSDKKALSDLIAEAK
KLDKDHYTIETWQNFEKALENAESIYDGNVPQDEVDLAKEALEKAKNELLEKNKKELSAA
LEMAKQVTPEQLDKVVPAVVTEFKAALENAQIIFDKKDANELEINKAFERLSNVMQMLEF
YKGDKTQLSALVEKIEKLNKNDYLSATWKNLESVLTTAKDVLNNPDALEIEVSETHDQLV
RTFLQLRLKPNKDLLSELINKAENTDQTKYTAVSLLSLKSALVEAKAVLDNNEATQDEVT
AVEILLKTALDNLVVKEITLDDPNAQTPPDAKPGNGVITATKTGDDSMMLTFALAGLLAL
AGSVIVLKKKEE

Enzyme Prediction     

No EC number prediction in MGYG000001400_01466.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	129	360	2.7e-66	0.9537037037037037

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00933	Glyco_hydro_3	5.01e-84	48	412	1	314	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	3.94e-82	47	489	1	368	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK05337	PRK05337	2.88e-51	92	360	26	277	beta-hexosaminidase; Provisional
PRK15098	PRK15098	5.85e-25	7	471	2	408	beta-glucosidase BglX.
COG1196	Smc	3.18e-05	793	1035	319	548	Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQY28952.1	0.0	1	1092	1	1092
QMW74468.1	0.0	1	1092	1	1092
QPS12259.1	0.0	1	1092	1	1092
QQV07224.1	0.0	1	1092	1	1092
BCL56675.1	2.06e-172	13	728	4	704

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3BMX_A	1.48e-115	7	680	2	634	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
4GYJ_A	4.86e-114	24	680	23	638	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3LK6_A	1.04e-113	33	680	2	608	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
6K5J_A	7.74e-72	47	611	11	506	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
4ZM6_A	4.60e-56	49	608	9	499	Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	8.08e-115	7	680	2	634	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	3.24e-76	47	657	16	596	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
B7UYS5	3.98e-35	82	359	17	271	Beta-hexosaminidase OS=Pseudomonas aeruginosa (strain LESB58) OX=557722 GN=nagZ PE=3 SV=1
Q02PG9	3.98e-35	82	359	17	271	Beta-hexosaminidase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=nagZ PE=3 SV=1
Q9HZK0	3.98e-35	82	359	17	271	Beta-hexosaminidase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=nagZ PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000500	0.998643	0.000201	0.000272	0.000180	0.000161

TMHMM  Annotations     

start	end
9	31
1068	1087