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CAZyme Information: MGYG000001391_00283

You are here: Home > Sequence: MGYG000001391_00283

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprobacter fastidiosus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter fastidiosus
CAZyme ID MGYG000001391_00283
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1261 138766.7 4.3819
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001391 3843461 Isolate not provided not provided
Gene Location Start: 270902;  End: 274687  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001391_00283.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 773 1052 4.1e-76 0.8888888888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02432 PLN02432 1.06e-41 764 1102 2 290
putative pectinesterase
pfam01095 Pectinesterase 2.73e-40 772 1049 1 260
Pectinesterase.
PLN02665 PLN02665 3.20e-35 775 1051 72 324
pectinesterase family protein
COG4677 PemB 2.25e-34 764 1101 71 405
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02773 PLN02773 5.04e-34 765 1048 1 263
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT77822.1 0.0 16 1259 12 1260
QCD39271.1 1.93e-213 342 1194 425 1255
QCP72963.1 1.93e-213 342 1194 425 1255
ADY51045.1 2.13e-208 341 1181 200 1036
ANU62443.1 9.90e-196 326 1176 744 1573

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5C1E_A 3.26e-26 781 1059 17 270
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 1.48e-25 781 1059 17 270
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 1.82e-24 772 1048 8 262
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 1.07e-23 770 1069 2 279
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 2.73e-21 768 1040 28 308
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q43043 3.05e-31 772 1104 58 359
Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1
O23038 1.29e-28 775 1066 91 364
Probable pectinesterase 8 OS=Arabidopsis thaliana OX=3702 GN=PME8 PE=2 SV=2
A1DBT4 1.55e-28 753 1050 14 286
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
Q4WBT5 3.85e-28 780 1050 41 286
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
B0Y9F9 3.85e-28 780 1050 41 286
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000293 0.998962 0.000224 0.000173 0.000172 0.000151

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001391_00283.