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CAZyme Information: MGYG000001388_00557
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Desulfitobacterium hafniense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_B; Desulfitobacteriia; Desulfitobacteriales; Desulfitobacteriaceae; Desulfitobacterium; Desulfitobacterium hafniense | |||||||||||
| CAZyme ID | MGYG000001388_00557 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3664; End: 5094 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00877 | NLPC_P60 | 1.48e-41 | 370 | 475 | 1 | 105 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| COG0791 | Spr | 9.79e-36 | 345 | 474 | 62 | 197 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
| PRK10838 | spr | 6.95e-29 | 359 | 475 | 68 | 183 | bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase. |
| PRK13914 | PRK13914 | 9.56e-28 | 346 | 475 | 354 | 480 | invasion associated endopeptidase. |
| NF033742 | NlpC_p60_RipB | 5.25e-22 | 339 | 461 | 54 | 191 | NlpC/P60 family peptidoglycan endopeptidase RipB. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CDX01502.1 | 0.0 | 1 | 476 | 1 | 476 |
| BAE83262.1 | 0.0 | 7 | 476 | 1 | 470 |
| AFM00457.1 | 1.49e-309 | 1 | 476 | 1 | 476 |
| AGA69173.1 | 7.08e-278 | 1 | 476 | 1 | 476 |
| AFQ42688.1 | 3.47e-201 | 23 | 476 | 23 | 478 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7CFL_A | 9.24e-24 | 360 | 475 | 16 | 136 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 2K1G_A | 2.33e-20 | 359 | 475 | 7 | 122 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 6B8C_A | 3.11e-19 | 354 | 461 | 24 | 131 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
| 4FDY_A | 7.26e-18 | 361 | 475 | 194 | 309 | ChainA, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50],4FDY_B Chain B, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50] |
| 3H41_A | 3.18e-17 | 361 | 476 | 192 | 309 | CRYSTALSTRUCTURE OF A NLPC/P60 FAMILY PROTEIN (BCE_2878) FROM BACILLUS CEREUS ATCC 10987 AT 1.79 A RESOLUTION [Bacillus cereus ATCC 10987] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P54421 | 1.27e-23 | 212 | 476 | 88 | 334 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| O31852 | 6.04e-21 | 212 | 476 | 159 | 413 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| O07532 | 1.03e-20 | 209 | 476 | 239 | 487 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| Q01836 | 3.08e-19 | 361 | 475 | 355 | 466 | Probable endopeptidase p60 OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=iap PE=3 SV=2 |
| P0AFV4 | 4.84e-19 | 359 | 475 | 68 | 183 | Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=mepS PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999978 | 0.000029 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
