CAZyme Information: MGYG000001380_01610

Basic Information

• Species: Ruminococcus_B gnavus
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Ruminococcus_B; Ruminococcus_B gnavus
• CAZyme ID: MGYG000001380_01610
• CAZy Family: CBM32
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1672	MGYG000001380_5|CGC1	186141.83	4.5067

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001380	3437962	Isolate	not provided	not provided

• Gene Location: Start: 38957; End: 43975 Strand: -

Full Sequence      

MLFGVLQPAVGMNEVRAEEGTVSEQNEVGVKYEALPKEPMKTSATASSYQDSAQWGDGNA
SLAFDGDVNKGWHSQYDSKTGPHWIQWSLGGVHNIGRIAYQVKGTGANGRFKEIKVEVKN
GEADWQTVKEETLADVGQGGSCNIDFDAVEATDVKITIKSSYNTYESGVLASAGELEVYK
VVQEVPQGTVNAKINGVEVGGESLSDVITKSGVTDEITSIEFVSGTVTSEDLALLKAKEK
GIFKTIETFKLNLSDTLKFVDKNGKNSKVLPNSAFYNFWALHTVELGGFEEIGSQAFENT
SSLVSVSIPNAVKIQNRAFYNGKKIKELNLDHVKEIETEAFYQCNALTALNVPKVLKIGE
KAFYGSKNLKELQLPATLETLGDSAFAVEQKNRRKLNVTSERVTPPVVTPGKNNPFAYAV
NSTLTVPAEAREAYVNAERWGDPKNYKWCSLQLEKDMTATDTYYITYHWEDQDNLAGVRP
NSVAPTLIDESSASYGADTQYRNVTIQPGPVGQDYQYEFTKVPRYNKRGEPAKWKLNPGS
YSTNYEIKTEKTGDYEFKATYTLRTRKQDKTVSVNWVGGDAENRPEIKVQMKRQKWSNTS
AYDEGEEITLNMQNNYTHTWENMVEYESGKDKYPYYPIYSIEEIRAVDGYEVTYSVEKND
KDVYPFDETGNIVITCTGEAIPEDVVKVNINKEREAGGTSLEDAVAKAGITADQVTSLEF
VSGKVTAGDLEYIQKNVNQIQEFKCNLKNGLTYEDKKGAQSTVFPGWTFSEKASLTTVEL
GGFTDIGSYAFWKTKNLTSVKIEDAQIIKASAFSGAEKLTEVNIPNVTKISQWGFSKCRN
LVTVNMPKVEKIGPGAFLASGYLNITLPASLKSISGAAFGVAESYGQPGEKVEFHVVMEG
ATPPTVEPEHNENSPFKDAAQTSTLEVPEGSEDTYLKSEFGDEEKGTWCNLPLKGISTDA
TVTFDVNGTLTTEKIPVGEMIGDKLPENPEKNGFVFTGWNTAKDGSGQEVTDQTVVEGDM
TVFAVFDDLKATDTWTLVYHWEDQDNLAGVRPALLTPRLIDESSSAHAADTQGNNVTFSP
GPAPQDYVYTFENVPRYNKIGEKAQWRVSPGIPAKNYKITLEEAGEHAYKATYALNVRKQ
DKTVKVEWAGGDEANRPEIKVRFVKRGFINDWVTEIEEVVLNEENGYTHTWKDMVEYESG
KEEYPYYPIYSIEAIETIDGYETTYSVEKMKDEDVYPFDENGQLVITNTAIDKQAPNVSV
KGEGNGDRFRKITGIAVHDTEGVKELKVNNTITVINSKYKYLTDIEKLGVKEGENTAVVT
DNAGNAKSVTFYYDTTAPTFNWIVDNKTQAQSKEVRLETSEEIQLPDEGWSLKGEENGVF
VYVKTFYANWKDKNFTVTDLAGNVSEPQFVEVKRIDNSRPTVVELTQDITDWTNKDVTVT
IKTSTDCVAPEGWKQVNKRTFTKVFNANGEYSVTLTSVTGLTGDAHLFSITNIDKEAPVI
DYAAIESANGYRKEIPVNEGEEYTEEKLVEMFTKPEWVSDNSGTATFKVDKWGLEHGLDG
YQPFTSKTPGEYKVRFYAYDAAGNNSSFDVYVKVLEPEVEERTTTVNYTVFIDGRVRTGQ
WTHTGTETGEFRFDLSMVKEDLPASYELEEGEEGYRMLQYGDTTSVTFYLTR

Enzyme Prediction     

No EC number prediction in MGYG000001380_01610.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM32	44	165	3.2e-18	0.9112903225806451

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
sd00036	LRR_3	2.73e-24	268	387	3	126	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
pfam13306	LRR_5	4.95e-22	290	387	1	99	Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
pfam13306	LRR_5	1.20e-21	268	387	1	121	Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
sd00036	LRR_3	3.10e-20	768	879	9	125	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
sd00036	LRR_3	7.63e-20	270	380	28	142	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QEI30621.1	0.0	1	1672	49	1720
QHB23133.1	0.0	1	1672	49	1720
QRT30606.1	4.22e-287	28	1671	49	1752
QHB24341.1	4.22e-287	28	1671	49	1752
QEI31850.1	4.22e-287	28	1671	49	1752

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2Y5P_A	1.21e-06	961	1026	6	70	B-repeatof Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_B B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_C B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_D B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.821179	0.177430	0.000711	0.000275	0.000147	0.000269

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001380_01610.