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CAZyme Information: MGYG000001371_05347
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus lautus_A | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus lautus_A | |||||||||||
| CAZyme ID | MGYG000001371_05347 | |||||||||||
| CAZy Family | PL29 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 6698; End: 9364 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL29 | 95 | 381 | 2.9e-27 | 0.9169435215946844 |
| CBM32 | 770 | 883 | 1.7e-18 | 0.9032258064516129 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam12708 | Pectate_lyase_3 | 8.04e-12 | 102 | 169 | 7 | 68 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| pfam00754 | F5_F8_type_C | 1.02e-11 | 767 | 883 | 1 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| pfam17132 | Glyco_hydro_106 | 1.06e-06 | 754 | 868 | 161 | 283 | alpha-L-rhamnosidase. |
| COG5434 | Pgu1 | 9.39e-06 | 100 | 138 | 86 | 124 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| cd00057 | FA58C | 0.005 | 763 | 875 | 9 | 134 | Substituted updates: Jan 31, 2002 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QOS79355.1 | 0.0 | 1 | 886 | 1 | 886 |
| QLG40566.1 | 0.0 | 1 | 886 | 1 | 886 |
| QAY65253.1 | 0.0 | 1 | 886 | 1 | 885 |
| QNK56161.1 | 2.11e-204 | 46 | 886 | 261 | 1110 |
| ATB28457.1 | 6.30e-132 | 51 | 565 | 31 | 542 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7D29_A | 3.71e-26 | 765 | 883 | 11 | 129 | CBM32of AlyQ [Persicobacter sp. CCB-QB2],7D2A_A CBM32 of AlyQ in complex with 4,5-unsaturated mannuronic acid [Persicobacter sp. CCB-QB2] |
| 5XNR_A | 7.36e-24 | 765 | 883 | 11 | 129 | TruncatedAlyQ with CBM32 and alginate lyase domains [Persicobacter sp. CCB-QB2] |
| 5ZU6_A | 1.39e-19 | 769 | 880 | 38 | 151 | ACBM32 derived from alginate lyase B (AlyB-OU02) [Vibrio] |
| 5ZU5_A | 1.51e-17 | 769 | 880 | 38 | 151 | Crystalstructure of a full length alginate lyase with CBM domain [Vibrio splendidus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q44496 | 3.19e-06 | 95 | 169 | 1 | 75 | Mannuronan C5-epimerase AlgE3 OS=Azotobacter vinelandii OX=354 GN=algE3 PE=3 SV=1 |
| Q44492 | 6.40e-06 | 95 | 271 | 1 | 139 | Mannuronan C5-epimerase AlgE5 OS=Azotobacter vinelandii OX=354 GN=algE5 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000639 | 0.998370 | 0.000318 | 0.000267 | 0.000195 | 0.000173 |