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CAZyme Information: MGYG000001354_01961

You are here: Home > Sequence: MGYG000001354_01961

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium dentium
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium dentium
CAZyme ID MGYG000001354_01961
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
495 52476.77 4.8431
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001354 2642081 Isolate not provided not provided
Gene Location Start: 2380135;  End: 2381622  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001354_01961.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05257 CHAP 1.40e-17 249 336 4 81
CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.
COG3942 COG3942 4.07e-17 249 349 67 160
Surface antigen [Cell wall/membrane/envelope biogenesis].
PRK08581 PRK08581 2.56e-16 230 359 490 618
amidase domain-containing protein.
pfam05382 Amidase_5 3.32e-05 80 203 18 140
Bacteriophage peptidoglycan hydrolase. At least one of the members of this family, the Pal protein from the pneumococcal bacteriophage Dp-1 has been shown to be a N-acetylmuramoyl-L-alanine amidase. According to the known modular structure of this and other peptidoglycan hydrolases from the pneumococcal system, the active site should reside at the N-terminal domain whereas the C-terminal domain binds to the choline residues of the cell wall teichoic acids. This family appears to be related to pfam00877.
pfam00877 NLPC_P60 3.90e-05 91 192 14 95
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAQ26934.1 0.0 1 495 1 495
ADB09628.1 0.0 1 495 1 495
VEG23600.1 0.0 1 495 1 495
QGM62701.1 4.96e-255 19 495 16 495
QTL82534.1 3.48e-212 19 495 16 494

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4CGK_A 7.61e-09 248 340 285 365
Crystalstructure of the essential protein PcsB from Streptococcus pneumoniae [Streptococcus pneumoniae D39],4CGK_B Crystal structure of the essential protein PcsB from Streptococcus pneumoniae [Streptococcus pneumoniae D39]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2G278 1.42e-11 250 356 178 275
Probable autolysin LDP OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_00773 PE=1 SV=1
Q8DVU8 6.25e-08 249 325 104 168
Putative hydrolase SMU_367 OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) OX=210007 GN=SMU_367 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.992464 0.007288 0.000030 0.000037 0.000023 0.000161

TMHMM  Annotations      download full data without filtering help

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21 43