CAZyme Information: MGYG000001323_00272

Basic Information

• Species: Providencia rettgeri_D
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Providencia; Providencia rettgeri_D
• CAZyme ID: MGYG000001323_00272
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
626	MGYG000001323_23|CGC2	69354.01	5.6347

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001323	4749568	Isolate	not provided	not provided

• Gene Location: Start: 88942; End: 90822 Strand: -

Full Sequence      

MKKFTLLSACIFSAFSMANPITQAQLNELWQDKQKSAQEIVNNMSEAEKIGQLFMLDFRY
WNKDSHGEPAPFLVMNDEVSKVINQYHLGSVILFRENLIDTPQTVELINKLQSSRSNLPL
FIGTDQEGGYVTRLRVGTEMPGNMALGAARNPALAELTGMIHGYELSSLGFNINFGPVVD
VNNNQNNPVIGVRSYSDDKNLVGTLATSYIQGIHKYNLLTSLKHFPGHGNVSADSHVDLP
VVNSDAKTWRDTELVPFKYALSHGADAVMTAHIIVPALDDDKITTLAGKQVGTPATLSKP
ILHGILRDELNYDGLIVTDAMDMGAIADNFDINWAVETSLLAGSDIILMPIKMWDSQAVS
RLDNMYRYLETQAEKNPELKKRIDESAKRVVLKKLQQEITAQPIDLVKAEQVVASKGHKD
IENMVSEQAITLIKNENVLPYQLKPLNRIFIISDEKPRNTLIQKQLNDIAQETGVAIITG
ESVVKLNESTLTQDEAKKLVQNQDLVLLTTYNLKDTPTNAQLIIDAANQLKTPIVVISSR
NPYDIAYLNDVNANIAIYGITGFDITNNNRNSLETNIRSGLRTLFANTHGQPLNPPQGLL
PVNIKNPQGNKVLFPYGHGETYSTIN

Enzyme Prediction     

No EC number prediction in MGYG000001323_00272.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	112	349	3.5e-61	0.9861111111111112

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG1472	BglX	2.05e-86	44	453	1	361	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	1.10e-83	48	390	4	313	Glycosyl hydrolase family 3 N terminal domain.
PRK05337	PRK05337	2.89e-42	89	349	27	279	beta-hexosaminidase; Provisional
PRK15098	PRK15098	1.48e-10	1	452	1	416	beta-glucosidase BglX.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBV06387.1	0.0	1	626	1	626
QKG46841.1	0.0	1	626	1	626
QNN33082.1	0.0	1	626	1	626
BBV14331.1	0.0	1	626	1	626
BBU99360.1	0.0	1	626	1	626

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3BMX_A	6.40e-124	6	624	8	638	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	3.35e-123	37	624	9	612	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	8.36e-123	37	624	39	642	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6K5J_A	2.60e-75	48	558	15	503	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
4ZM6_A	8.58e-59	42	561	5	502	Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	3.50e-123	6	624	8	638	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	4.58e-73	44	440	16	424	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q9PAZ0	2.20e-36	88	349	24	277	Beta-hexosaminidase OS=Xylella fastidiosa (strain 9a5c) OX=160492 GN=nagZ PE=3 SV=1
Q7WUL3	2.31e-36	44	559	26	528	Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
B2I6G9	4.14e-36	88	349	24	277	Beta-hexosaminidase OS=Xylella fastidiosa (strain M23) OX=405441 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000370	0.998816	0.000252	0.000179	0.000184	0.000169

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001323_00272.