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CAZyme Information: MGYG000001322_02156
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gemmiger variabilis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger variabilis | |||||||||||
| CAZyme ID | MGYG000001322_02156 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Beta-hexosaminidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1497836; End: 1499083 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 130 | 366 | 1.3e-49 | 0.9814814814814815 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG1472 | BglX | 2.98e-68 | 56 | 405 | 1 | 315 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam00933 | Glyco_hydro_3 | 6.24e-56 | 57 | 400 | 1 | 315 | Glycosyl hydrolase family 3 N terminal domain. |
| PRK05337 | PRK05337 | 4.03e-28 | 77 | 376 | 13 | 292 | beta-hexosaminidase; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QAT41975.1 | 4.33e-105 | 47 | 409 | 41 | 396 |
| ATL88810.1 | 9.46e-101 | 49 | 408 | 35 | 379 |
| QIB69696.1 | 5.52e-100 | 47 | 405 | 41 | 393 |
| CAB1254359.1 | 1.09e-97 | 12 | 409 | 10 | 410 |
| CBL35090.1 | 1.48e-94 | 48 | 405 | 50 | 394 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6K5J_A | 1.29e-61 | 56 | 406 | 11 | 341 | Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae] |
| 3BMX_A | 4.59e-51 | 35 | 402 | 21 | 393 | Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis] |
| 3LK6_A | 2.28e-50 | 51 | 402 | 11 | 367 | ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis] |
| 4GYJ_A | 2.51e-50 | 35 | 402 | 25 | 397 | Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168] |
| 3TEV_A | 9.53e-45 | 101 | 388 | 39 | 312 | Thecrystal structure of glycosyl hydrolase from Deinococcus radiodurans R1 [Deinococcus radiodurans R1],3TEV_B The crystal structure of glycosyl hydrolase from Deinococcus radiodurans R1 [Deinococcus radiodurans R1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P40406 | 2.51e-50 | 35 | 402 | 21 | 393 | Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1 |
| P48823 | 4.53e-46 | 92 | 402 | 50 | 380 | Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1 |
| L7N6B0 | 1.72e-35 | 104 | 407 | 86 | 385 | Beta-hexosaminidase LpqI OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=lpqI PE=1 SV=1 |
| A0A0H3M1P5 | 4.57e-35 | 104 | 407 | 86 | 385 | Beta-hexosaminidase LpqI OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) OX=410289 GN=lpqI PE=3 SV=1 |
| Q4USG7 | 2.27e-27 | 101 | 379 | 19 | 292 | Beta-hexosaminidase OS=Xanthomonas campestris pv. campestris (strain 8004) OX=314565 GN=nagZ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000109 | 0.088650 | 0.911112 | 0.000044 | 0.000049 | 0.000040 |