logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001296_00315

You are here: Home > Sequence: MGYG000001296_00315

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pediococcus acidilactici
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus acidilactici
CAZyme ID MGYG000001296_00315
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1885 204248.03 10.2931
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001296 1929633 Isolate not provided not provided
Gene Location Start: 291686;  End: 297343  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001296_00315.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR01760 tape_meas_TP901 1.93e-41 183 542 1 348
phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions]
pfam10145 PhageMin_Tail 1.03e-32 229 435 1 200
Phage-related minor tail protein. Members of this family are found in putative phage tail tape measure proteins.
PRK13914 PRK13914 6.22e-12 1463 1574 363 469
invasion associated endopeptidase.
pfam00877 NLPC_P60 4.05e-11 1479 1572 1 87
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
PTZ00121 PTZ00121 4.14e-10 857 1028 1309 1484
MAEBL; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZP90624.1 0.0 1 1885 1 1885
QHM43903.1 8.20e-185 1 545 1 543
QLE67413.1 1.29e-184 50 545 96 591
QLE69842.1 1.29e-184 50 545 96 591
QGX68170.1 2.95e-184 1 545 1 543

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6B8C_A 2.41e-08 1466 1564 27 122
Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]
7CFL_A 2.51e-08 1478 1567 25 115
ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E7DNB6 1.47e-26 161 545 35 405
Tape measure protein OS=Pneumococcus phage Dp-1 OX=59241 GN=TMP PE=4 SV=1
Q01839 6.58e-11 1477 1574 419 512
Probable endopeptidase p60 OS=Listeria welshimeri OX=1643 GN=iap PE=3 SV=1
Q01838 2.61e-10 1477 1574 418 511
Probable endopeptidase p60 OS=Listeria seeligeri OX=1640 GN=iap PE=3 SV=1
Q01836 2.95e-10 1477 1573 362 454
Probable endopeptidase p60 OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=iap PE=3 SV=2
P21171 3.11e-10 1477 1574 379 472
Probable endopeptidase p60 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=iap PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001296_00315.