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CAZyme Information: MGYG000001276_03476

You are here: Home > Sequence: MGYG000001276_03476

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium limosum
Lineage Bacteria; Firmicutes_A; Clostridia; Eubacteriales; Eubacteriaceae; Eubacterium; Eubacterium limosum
CAZyme ID MGYG000001276_03476
CAZy Family CBM54
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2394 MGYG000001276_43|CGC1 251646.61 4.4534
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001276 3903827 MAG Italy Europe
Gene Location Start: 14250;  End: 21434  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001276_03476.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM54 33 137 7e-20 0.9298245614035088

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5492 YjdB 1.73e-19 386 543 177 319
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 1.24e-13 867 960 167 261
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 7.47e-12 391 467 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
COG5492 YjdB 1.87e-09 468 543 170 246
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 2.95e-09 882 958 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCT72360.1 0.0 1 2393 1 2372
QSW19407.1 3.52e-29 388 593 1797 2010
ART28007.1 2.17e-28 390 1022 1296 1932
AWW26513.1 1.90e-26 1 469 1 439
BBH22747.1 3.09e-23 400 951 793 1316

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33747 4.67e-17 388 543 35 185
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
P35838 2.08e-09 391 469 237 316
Uncharacterized protein CA_C0552 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_C0552 PE=4 SV=2
P85991 1.16e-08 388 537 88 236
Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2
A0A3R0A696 1.24e-07 882 960 275 351
Alpha-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=blArafA PE=1 SV=1
P59812 4.58e-06 881 961 42 125
Uncharacterized protein BC_1230 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=BC_1230 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000067 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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