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CAZyme Information: MGYG000001265_03359
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Methylobacterium sp002778835 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylobacterium; Methylobacterium sp002778835 | |||||||||||
| CAZyme ID | MGYG000001265_03359 | |||||||||||
| CAZy Family | CE11 | |||||||||||
| CAZyme Description | UDP-3-O-acyl-N-acetylglucosamine deacetylase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 837; End: 1784 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE11 | 6 | 279 | 4.8e-101 | 0.992619926199262 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK13186 | lpxC | 2.53e-160 | 5 | 301 | 3 | 295 | UDP-3-O-acyl-N-acetylglucosamine deacetylase. |
| pfam03331 | LpxC | 2.84e-147 | 6 | 280 | 1 | 271 | UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. |
| COG0774 | LpxC | 1.40e-134 | 5 | 294 | 3 | 291 | UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis]. |
| TIGR00325 | lpxC | 1.72e-96 | 5 | 299 | 2 | 292 | UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK13188 | PRK13188 | 1.32e-76 | 1 | 272 | 1 | 292 | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWN41324.1 | 9.26e-202 | 1 | 315 | 1 | 315 |
| AMB46090.1 | 3.09e-200 | 1 | 315 | 1 | 315 |
| QEE39578.1 | 1.26e-199 | 1 | 315 | 1 | 315 |
| CAX25359.1 | 1.26e-199 | 1 | 315 | 1 | 315 |
| SOR29421.1 | 1.26e-199 | 1 | 315 | 1 | 315 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4MDT_A | 1.57e-70 | 5 | 291 | 3 | 288 | Structureof LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_B Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_C Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli],4MDT_D Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine [Escherichia coli] |
| 3P3G_A | 1.91e-70 | 5 | 291 | 3 | 288 | CrystalStructure of the Escherichia coli LpxC/LPC-009 complex [Escherichia coli IHE3034],3PS1_A Crystal structure of the Escherichia Coli LPXC/LPC-011 complex [Escherichia coli IHE3034],3PS2_A Crystal structure of the Escherichia Coli LPXC/LPC-012 complex [Escherichia coli IHE3034],3PS3_A Crystal structure of the Escherichia Coli LPXC/LPC-053 complex [Escherichia coli IHE3034],4IS9_A Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4IS9_B Crystal Structure of the Escherichia coli LpxC/L-161,240 complex [Escherichia coli IHE3034],4ISA_A Crystal Structure of the Escherichia coli LpxC/BB-78485 complex [Escherichia coli IHE3034] |
| 4MQY_A | 2.21e-70 | 5 | 291 | 3 | 288 | CrystalStructure of the Escherichia coli LpxC/LPC-138 complex [Escherichia coli] |
| 3NZK_A | 3.75e-70 | 5 | 291 | 8 | 293 | Structureof LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica],3NZK_B Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor [Yersinia enterocolitica] |
| 6MO4_A | 1.66e-69 | 3 | 288 | 5 | 288 | Co-Crystalstructure of P. aeruginosa LpxC-50067 complex [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B0CHL2 | 2.37e-94 | 6 | 290 | 5 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) OX=470137 GN=lpxC PE=3 SV=1 |
| Q2YLZ2 | 2.37e-94 | 6 | 290 | 5 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella abortus (strain 2308) OX=359391 GN=lpxC PE=3 SV=1 |
| A9M683 | 2.37e-94 | 6 | 290 | 5 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) OX=483179 GN=lpxC PE=3 SV=1 |
| Q57C85 | 2.37e-94 | 6 | 290 | 5 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=lpxC PE=3 SV=1 |
| B2S6P7 | 2.37e-94 | 6 | 290 | 5 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Brucella abortus (strain S19) OX=430066 GN=lpxC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.994294 | 0.005212 | 0.000377 | 0.000021 | 0.000010 | 0.000110 |