CAZyme Information: MGYG000001151_01856

Basic Information

• Species: Ruminococcus_C sp000433635
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp000433635
• CAZyme ID: MGYG000001151_01856
• CAZy Family: CBM79
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
861		93474.93	4.2192

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001151	2508735	MAG	China	Asia

• Gene Location: Start: 30283; End: 32868 Strand: -

Full Sequence      

MVHTVWKKRAIAAVMSVAMLGTSMAATPIVWAAGNEISVNKTLEVAIPDPSNPSTPTNKD
ACTYTGLMSDIFGSGENHTTFTTLQFNFKADEEVTNFSYYFGINLDEKPWWTDLSKECTP
YASEFSVVVNVKDLDLKGQNIGYCIDEKWHSDRHLEFQNCYAANGETKIPVTLTSITVNG
TSDTSNGTKPIDPSNPDNPGGEDKEAQFPNTGDGGFYSSKNEQSSNYSFVDNKDGTATVK
STITKKLNADDLKKLAQKEYGTDTITLTPSPKGADYSEDGYADKYGDENSEATIRKNGDP
LNSHKFSYDDFGIGSGDETTKITPEALTVVMRAKDNQNVTRIMYGGGLNVEAGTPADTEK
AKAKIGRDEAGNVTDDSLAGFKKDGNAGYWYNDIGADSYDDVAKNLENVGYKVGSPDTEN
GLVQIQNGKDLKEQSFGDYVQVTWDVPEDVKQYADAASGKTISFQLWYGEIEAEEYTPLE
SLDIDSAMLTYTEELTFPYKSQTKELTINKELKTGDDPLEILYSDLGMTYETTADVYAIE
FTLDSKVDARQLVLGNGTTVVDKASDYWYQAGSIALVKSDDKNHEYTYMWIMPADVANVT
LGEDGTIMSLLNKVSTEKEGDHFSLALYYADNNDGKEVTSVNLKSVSAYYDTDNRKNTAK
ADLFEKDLSVSPKNITMKVGETKKISTNVDGCTFTSEDPTIATVDENGNVVGVGAGTVVI
NVETPKGQKDTVTVTVNPADTTATTTTTTTTTTTTTTTTTTTTTKATTTTTQATTTTTTT
TTKAFKPYYGDVNLDGVVDLRDTIKLNKYLAGQVTLSDAAMINADVTETSGAVDDKDATK
LMRFVLFLVTDLGPGTPDSAN

Enzyme Prediction     

No EC number prediction in MGYG000001151_01856.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam18522	DUF5620	4.01e-22	513	649	1	119	Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module.
pfam18522	DUF5620	5.27e-22	298	490	1	119	Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module.
pfam18522	DUF5620	5.26e-16	79	179	20	119	Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module.
cd14256	Dockerin_I	1.33e-11	789	846	1	57	Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam00404	Dockerin_1	1.25e-05	790	846	1	56	Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CCZ83178.1	0.0	1	861	1	877
EWM54821.1	2.11e-47	219	600	185	511
CBL17555.1	5.24e-42	7	650	8	506
CCZ84116.1	1.38e-08	789	848	747	808
ERJ92224.1	8.45e-07	789	852	784	846

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000285	0.999020	0.000157	0.000198	0.000166	0.000141

TMHMM  Annotations     

start	end
12	34