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CAZyme Information: MGYG000001146_00486

You are here: Home > Sequence: MGYG000001146_00486

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA737 sp900543215
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA737; UBA737 sp900543215
CAZyme ID MGYG000001146_00486
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
595 MGYG000001146_9|CGC2 64483.42 5.0281
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001146 1763227 MAG China Asia
Gene Location Start: 49623;  End: 51410  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001146_00486.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH136 104 594 8.4e-123 0.9918533604887984

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 8.32e-08 276 419 34 150
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 5.24e-05 311 458 6 135
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam17161 DUF5123 3.88e-04 452 544 3 97
Domain of unknown function (DUF5123).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SMF84525.1 1.01e-93 105 595 38 521
QDS99205.1 1.27e-91 105 595 30 510
ANY71259.1 2.20e-87 105 595 32 515
QGQ95108.1 4.00e-87 84 592 18 510
AIQ58808.1 7.28e-87 105 594 39 506

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 2.61e-46 97 594 3 576
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
7V6I_A 1.86e-38 97 594 8 608
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
5GQC_A 5.84e-35 100 594 15 596
Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
6KQT_A 5.51e-33 105 461 247 641
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 2.40e-32 105 461 247 641
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000064 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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