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CAZyme Information: MGYG000001082_01806
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus_E sp900755995 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Ruminococcus_E; Ruminococcus_E sp900755995 | |||||||||||
| CAZyme ID | MGYG000001082_01806 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | DNA mismatch repair protein MutS | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 10748; End: 18679 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 6.86e-83 | 1313 | 1835 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| pfam01624 | MutS_I | 2.18e-15 | 718 | 813 | 7 | 102 | MutS domain I. This domain is found in proteins of the MutS family (DNA mismatch repair proteins) and is found associated with pfam00488, pfam05188, pfam05192 and pfam05190. The MutS family of proteins is named after the Salmonella typhimurium MutS protein involved in mismatch repair; other members of the family included the eukaryotic MSH 1,2,3, 4,5 and 6 proteins. These have various roles in DNA repair and recombination. Human MSH has been implicated in non-polyposis colorectal carcinoma (HNPCC) and is a mismatch binding protein. The aligned region corresponds with globular domain I, which is involved in DNA binding, in Thermus aquaticus MutS as characterized in. |
| pfam18840 | LPD25 | 2.26e-14 | 861 | 981 | 6 | 99 | Large polyvalent protein associated domain 25. This is an alpha and beta fold domain found in polyvalent proteins of conjugative elements. |
| COG0553 | HepA | 7.85e-13 | 1686 | 2344 | 239 | 848 | Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]. |
| COG0249 | MutS | 1.39e-09 | 702 | 794 | 2 | 85 | DNA mismatch repair ATPase MutS [Replication, recombination and repair]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 0.0 | 1023 | 2526 | 1548 | 3146 |
| QIW86704.1 | 0.0 | 1023 | 2526 | 1616 | 3214 |
| QIW86628.1 | 0.0 | 1023 | 2526 | 1616 | 3214 |
| AEY69616.1 | 1.61e-309 | 1023 | 2547 | 1689 | 3311 |
| AXF51455.1 | 2.83e-306 | 1023 | 2530 | 1782 | 3390 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1NNE_A | 1.71e-06 | 718 | 800 | 20 | 105 | CrystalStructure of the MutS-ADPBeF3-DNA complex [Thermus aquaticus],1NNE_B Crystal Structure of the MutS-ADPBeF3-DNA complex [Thermus aquaticus] |
| 1EWQ_A | 6.62e-06 | 718 | 800 | 20 | 105 | ChainA, DNA MISMATCH REPAIR PROTEIN MUTS [Thermus aquaticus],1EWQ_B Chain B, DNA MISMATCH REPAIR PROTEIN MUTS [Thermus aquaticus] |
| 1FW6_A | 6.63e-06 | 718 | 800 | 20 | 105 | CRYSTALSTRUCTURE OF A TAQ MUTS-DNA-ADP TERNARY COMPLEX [Thermus aquaticus],1FW6_B CRYSTAL STRUCTURE OF A TAQ MUTS-DNA-ADP TERNARY COMPLEX [Thermus aquaticus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 3.25e-33 | 1060 | 2376 | 68 | 1591 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
| A0B976 | 6.50e-09 | 716 | 794 | 10 | 90 | DNA mismatch repair protein MutS OS=Methanothrix thermoacetophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) OX=349307 GN=mutS PE=3 SV=1 |
| A4W4J7 | 5.65e-08 | 718 | 794 | 14 | 91 | DNA mismatch repair protein MutS OS=Streptococcus suis (strain 98HAH33) OX=391296 GN=mutS PE=3 SV=1 |
| Q03VV4 | 5.67e-08 | 718 | 794 | 13 | 90 | DNA mismatch repair protein MutS OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / DSM 20343 / BCRC 11652 / CCM 1803 / JCM 6124 / NCDO 523 / NBRC 100496 / NCIMB 8023 / NCTC 12954 / NRRL B-1118 / 37Y) OX=203120 GN=mutS PE=3 SV=1 |
| B1N025 | 9.80e-08 | 718 | 794 | 13 | 90 | DNA mismatch repair protein MutS OS=Leuconostoc citreum (strain KM20) OX=349519 GN=mutS PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000041 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |