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CAZyme Information: MGYG000001063_05679

You are here: Home > Sequence: MGYG000001063_05679

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900540475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900540475
CAZyme ID MGYG000001063_05679
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
592 MGYG000001063_146|CGC4 68331.5 6.7932
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001063 7637037 MAG Sweden Europe
Gene Location Start: 149235;  End: 151013  Strand: +

Full Sequence      Download help

MNLIDAVSSL  QLFKRKETPK  QLTTVWGEQL  DPEHVLEEYP  RPQLKRNAWI  NLNGYWNYRI60
TKDRKYPGNI  KQRILVPFSP  EASLSQVNHT  LMPDEYLWYE  KSFYLEDFPI  PSPGKRLILH120
FGAVDQICSV  WCNKKFVCSH  QGGYLPFSAD  ITSRLRSGEN  VITVRVQDET  DTSCQSRGKQ180
TLQPGGMFYT  PQSGIWQTVW  MEWVPENYIS  SIRITPQLDE  AAAILEVTMQ  GDPACEKNIT240
VYADGREIFS  VQTQKESQTI  PIRDLRPWSP  ESPFLYDITI  TAGNDRVSSY  FAMRKFSSCT300
DSRGIPRLCL  NNQPYFQNGV  LDQGYWPDGL  YTPPSDDAMI  FDIQAMKDLG  FNMIRKHIKI360
EPLRWYYHCD  RLGMIVWQDI  VNGGGRSYLT  FLCYLPTLLP  FVTAHFKDSH  YKLFSRCDSQ420
GKRLWLRECK  ATIEHLYNCP  SIGLWSAFNE  GWGQFDAVKV  TNLIHSLDST  RPVDHASGWY480
DQHCGDVKSV  HNYFRPIKAE  LDSRPFVLSE  YGGYICHIPE  HSYSQQVFGY  LKCKDTNEFT540
HKFQDVMEEI  RNASKEGLCA  AVYTQVSDVE  EEANGLYSYD  RKVCKVNRPG  KG592

Enzyme Prediction      help

No EC number prediction in MGYG000001063_05679.

CAZyme Signature Domains help

Created with Snap29598811814817720723626629632535538441444447350353256240511GH2
Family Start End Evalue family coverage
GH2 40 511 9.6e-100 0.5412234042553191

CDD Domains      download full data without filtering help

Created with Snap29598811814817720723626629632535538441444447350353256250473LacZ51512PRK1015099376lacZ99376ebgA98201Glyco_hydro_2_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 4.57e-31 50 473 13 429
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 7.10e-28 51 512 14 510
beta-D-glucuronidase; Provisional
PRK09525 lacZ 2.11e-15 99 376 124 410
beta-galactosidase.
PRK10340 ebgA 4.06e-12 99 376 113 394
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02837 Glyco_hydro_2_N 8.09e-12 98 201 68 165
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Created with Snap2959881181481772072362662963253553844144444735035325621588QHQ59405.1|GH21589CUH91999.1|GH21587BCJ96029.1|GH25588BCJ97853.1|GH21586QRT49650.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QHQ59405.1 4.20e-247 1 588 1 590
CUH91999.1 8.28e-243 1 589 1 599
BCJ96029.1 5.32e-239 1 587 1 589
BCJ97853.1 7.22e-225 5 588 4 587
QRT49650.1 3.12e-209 1 586 1 596

PDB Hits      download full data without filtering help

Created with Snap295988118148177207236266296325355384414444473503532562165877SF2_A524736U7J_A335137VQM_A395126U7I_A513886D4O_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7SF2_A 5.53e-142 16 587 6 571
ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_C Chain C, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_D Chain D, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_E Chain E, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_F Chain F, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838]
6U7J_A 2.66e-24 52 473 24 445
UnculturedClostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_B Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_C Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_D Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.]
7VQM_A 1.51e-22 33 513 21 500
ChainA, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_B Chain B, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_C Chain C, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_D Chain D, GH2 beta-galacturonate AqGalA [Aquimarina sp.]
6U7I_A 1.08e-21 39 512 3 506
Faecalibacteriumprausnitzii Beta-glucuronidase [Faecalibacterium prausnitzii],6U7I_B Faecalibacterium prausnitzii Beta-glucuronidase [Faecalibacterium prausnitzii],6U7I_C Faecalibacterium prausnitzii Beta-glucuronidase [Faecalibacterium prausnitzii],6U7I_D Faecalibacterium prausnitzii Beta-glucuronidase [Faecalibacterium prausnitzii]
6D4O_A 1.51e-21 51 388 17 383
Eubacteriumeligens beta-glucuronidase bound to an amoxapine-glucuronide conjugate [Lachnospira eligens]

Swiss-Prot Hits      download full data without filtering help

Created with Snap29598811814817720723626629632535538441444447350353256280588sp|P77989|BGAL_THEP337502sp|Q03WL0|BGAL_LEUMM119503sp|Q48727|BGAL_LACLA31511sp|Q56307|BGAL_THEMA98522sp|T2KPJ7|PLH8_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P77989 8.45e-22 80 588 38 523
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
Q03WL0 3.02e-19 37 502 65 502
Beta-galactosidase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / DSM 20343 / BCRC 11652 / CCM 1803 / JCM 6124 / NCDO 523 / NBRC 100496 / NCIMB 8023 / NCTC 12954 / NRRL B-1118 / 37Y) OX=203120 GN=lacZ PE=3 SV=1
Q48727 8.43e-18 119 503 129 482
Beta-galactosidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=lacZ PE=3 SV=3
Q56307 8.80e-18 31 511 53 508
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
T2KPJ7 1.21e-16 98 522 106 526
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001063_05679.