You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001060_00737
You are here: Home > Sequence: MGYG000001060_00737
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Dialister hominis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_C; Negativicutes; Veillonellales; Dialisteraceae; Dialister; Dialister hominis | |||||||||||
| CAZyme ID | MGYG000001060_00737 | |||||||||||
| CAZy Family | GH39 | |||||||||||
| CAZyme Description | HTH-type transcriptional activator RhaS | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 19415; End: 21760 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH39 | 428 | 722 | 1.6e-17 | 0.6937354988399071 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3664 | XynB | 2.57e-68 | 342 | 774 | 1 | 425 | Beta-xylosidase [Carbohydrate transport and metabolism]. |
| COG2207 | AraC | 8.57e-24 | 162 | 267 | 19 | 124 | AraC-type DNA-binding domain and AraC-containing proteins [Transcription]. |
| smart00342 | HTH_ARAC | 8.14e-23 | 179 | 262 | 1 | 84 | helix_turn_helix, arabinose operon control protein. |
| COG4753 | YesN | 1.55e-19 | 87 | 266 | 297 | 475 | Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains [Signal transduction mechanisms, Transcription]. |
| pfam12833 | HTH_18 | 2.42e-19 | 186 | 264 | 2 | 81 | Helix-turn-helix domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QHS24385.1 | 5.35e-283 | 22 | 777 | 1 | 759 |
| QOF64550.1 | 8.20e-214 | 7 | 777 | 6 | 780 |
| QOF56795.1 | 8.20e-214 | 7 | 777 | 6 | 780 |
| QUR88544.1 | 6.56e-213 | 7 | 777 | 6 | 780 |
| QGF42946.1 | 1.86e-212 | 7 | 777 | 6 | 780 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6SWI_A | 8.58e-11 | 164 | 264 | 2 | 107 | TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus] |
| 3LSG_A | 1.78e-07 | 172 | 263 | 11 | 103 | Thecrystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum],3LSG_B The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum],3LSG_C The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum],3LSG_D The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum],3LSG_E The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586 [Fusobacterium nucleatum subsp. nucleatum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q6GKK1 | 9.82e-83 | 4 | 775 | 1 | 741 | Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1 |
| Q5HJR8 | 3.65e-82 | 20 | 775 | 18 | 741 | Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2 |
| Q6GD21 | 7.02e-82 | 20 | 775 | 18 | 741 | Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1 |
| Q8NYT6 | 7.02e-82 | 20 | 775 | 18 | 741 | Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1 |
| Q7A882 | 9.65e-81 | 20 | 775 | 18 | 741 | Uncharacterized HTH-type transcriptional regulator SA0097 OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0097 PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.980518 | 0.019240 | 0.000159 | 0.000032 | 0.000025 | 0.000053 |