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CAZyme Information: MGYG000000562_01739
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira sp000437735 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp000437735 | |||||||||||
| CAZyme ID | MGYG000000562_01739 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 49872; End: 53900 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 6.00e-40 | 780 | 1074 | 88 | 396 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam01095 | Pectinesterase | 1.43e-38 | 787 | 1074 | 7 | 289 | Pectinesterase. |
| PLN02773 | PLN02773 | 3.61e-33 | 787 | 1074 | 12 | 290 | pectinesterase |
| PLN02432 | PLN02432 | 1.92e-31 | 792 | 1081 | 23 | 287 | putative pectinesterase |
| PLN02708 | PLN02708 | 2.75e-30 | 792 | 1056 | 253 | 516 | Probable pectinesterase/pectinesterase inhibitor |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACR72234.1 | 0.0 | 3 | 1108 | 3 | 1093 |
| ACZ98653.1 | 4.39e-147 | 306 | 1086 | 112 | 873 |
| QEH70392.1 | 1.12e-136 | 290 | 1090 | 508 | 1287 |
| ADD62022.1 | 1.46e-131 | 294 | 1081 | 775 | 1550 |
| CED92996.1 | 1.75e-85 | 63 | 1074 | 47 | 998 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3UW0_A | 3.53e-35 | 792 | 1083 | 44 | 361 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 2NSP_A | 3.14e-32 | 784 | 1083 | 11 | 337 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 2NTB_A | 9.01e-28 | 784 | 1083 | 11 | 337 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 1QJV_A | 4.06e-27 | 784 | 1083 | 11 | 337 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 1XG2_A | 1.89e-21 | 787 | 1056 | 10 | 268 | ChainA, Pectinesterase 1 [Solanum lycopersicum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C1A9 | 7.71e-27 | 784 | 1083 | 35 | 361 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| P0C1A8 | 4.64e-26 | 784 | 1083 | 35 | 361 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
| Q9FJ21 | 3.88e-24 | 787 | 1056 | 265 | 524 | Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1 |
| Q43043 | 3.73e-23 | 787 | 1062 | 64 | 329 | Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1 |
| O49006 | 1.73e-22 | 718 | 1081 | 207 | 576 | Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PME3 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.149554 | 0.837033 | 0.012291 | 0.000532 | 0.000267 | 0.000279 |
