logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000533_01528

You are here: Home > Sequence: MGYG000000533_01528

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phascolarctobacterium_A sp900551335
Lineage Bacteria; Firmicutes_C; Negativicutes; Acidaminococcales; Acidaminococcaceae; Phascolarctobacterium_A; Phascolarctobacterium_A sp900551335
CAZyme ID MGYG000000533_01528
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
400 MGYG000000533_12|CGC1 44238.23 7.0213
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000533 2190020 MAG Fiji Oceania
Gene Location Start: 71318;  End: 72520  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000533_01528.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 45 399 1e-116 0.9971830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 1.63e-155 46 399 1 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 2.44e-127 20 399 19 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTV78142.1 8.47e-193 1 400 1 405
QNP78041.1 1.43e-156 24 400 37 410
BBG63384.1 1.35e-154 24 400 37 410
ARP42412.1 2.59e-102 20 400 31 418
QNU37528.1 2.59e-102 26 399 38 418

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K05_A 2.66e-77 27 400 16 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A 2.90e-44 39 400 19 369
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 1.71e-94 34 343 46 360
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000218 0.999144 0.000165 0.000151 0.000138 0.000132

TMHMM  Annotations      download full data without filtering help

start end
5 27