CAZyme Information: MGYG000000476_00587

Basic Information

• Species: UMGS882 sp900546385
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-382; UMGS882; UMGS882 sp900546385
• CAZyme ID: MGYG000000476_00587
• CAZy Family: SLH
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1416	MGYG000000476_3|CGC2	150960.78	5.3281

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000476	2809926	MAG	Fiji	Oceania

• Gene Location: Start: 87985; End: 92235 Strand: +

Full Sequence      

MNNGKGNKLKLAAKLAGSLCAAVLLTGSLGVSAAKLTDIDGHWSKDYVEYGVQKGYINGY
EDGSFRPEATVTRAEFSKMINASVGIAKTADISFNDISSGDWYYQEVRKAVYAGYTNGYE
DDTFRAENSITREEAAVILSRIATRAEKTKSLSSFRDTDEIADWAEDAFELVCSKGYITG
DEQKRLQPKGLLTRGQAAKIIYSLITTENICAKDYTISAFNPTCSETIFTGDVIFSSNLL
KSSLSLDGCRILGMLKISGRGGAEISAKDSHIGAIEVKGADPTITLADSYAKYVYLDAPA
SLAGSRYGTVYLSGDNLVSGTVEINAKPEKTVISTDSIVRFGNLPFLEIAKKASITVQSG
KIASMTVSSGAKGSVITLSNDVEVDNLTVNAAVSFRGKGEIANAVNNVSGVTYETRPNKL
TGKDSSSDSSGETDPDGYFSPSLISPSKSETGVSISTDIVLAFGRTVYDADGDNLTESYI
RRNFELHRSSATGTEISFDVSMSSAHRQITLVPDEKLDYGTRYYVVAKAGVLTDTNGNKN
SAISTYFTTVSSGSSSSDTSSKITFSPKNGASDVSTSGKMTITFSSAVYDLDGDTPTSSY
LSRQAIELREKSTSGTTVPISVTINSTRKVLTVTPEEVLKVNTRYYLIVLDRKLMYSNKT
KISRSYVNFTTSADLNVTITPANGATGVALDEEIKLSFNTEIFRPSGSNVTQTYLAEQAL
ELRKSSATGTKITCTAVLNSDRKTVRLIPSELEPGTRYYVVLPAGKLAGEGGEENKKITS
YFTTANAMTPAFDPANGATDVSPTDNIVIKFSDALYDKDKKPITAEYVAEKVVVLKKNSS
SGTAIPFEVAVASDYKSFTVKPKTSFVTNASYYVAVNRNTLYNESGKANTAGSSLFKTSY
SNAPDFLPYNGEKNVEVGSTIQITFDRRMYAIGGAELTTNYVRNNVVELYKDGYDGTAVA
FTVTLSSDKQTITIRPSAKLSGDTEYLVVLRKASLEDSGGNENALYTSTFTTAEAVSTGI
TVTPAKATTGVSVSTKITVEFESAVYRTGGSVVSNAYLVNNVFELRKGSSSSGKKIECTA
EMDAKNRVMTITPAEDLEKSTTYYLRILSGSLQYGDGTTKVPAYSSYFTTGDGKPVVSSL
KVVEAGASQLVCEVISSSDGNVTVSALDGGKTVSTATTAITAGTATRLTVSDLASNRTYT
LSAVVQSTSGELSAARTASGKTTTPFTFAVEDKTDTTLTVRIQTNCKGTLDITYTARKTG
KKETRVTGLLLEKDTKRDFVISDLTPSTEYDVTATFTDLLDGSYTVSDRVTTAAAQKEVL
EITGLTLISSTGDIYEADVKDGKATLTIEKAEYITLKGSSSVANAKFTFNGETVNPDTAS
GRITVTPGEDTIVAVTLTSGVTGTVVKATLTVSVRK

Enzyme Prediction     

No EC number prediction in MGYG000000476_00587.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
SLH	94	135	2.9e-17	0.9761904761904762

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033190	inl_like_NEAT_1	9.75e-14	41	206	588	753	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	8.35e-10	37	76	2	42	S-layer homology domain.
pfam00395	SLH	1.62e-09	94	135	1	42	S-layer homology domain.
NF033190	inl_like_NEAT_1	1.15e-07	35	145	642	754	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033190	inl_like_NEAT_1	1.56e-07	35	204	521	690	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNL44990.1	2.32e-162	8	1205	2	969
VDN48011.1	3.39e-101	27	690	22	673
QOX65054.1	8.57e-95	32	694	51	703
VDN48012.1	7.38e-79	19	671	12	653
BAU26536.1	3.03e-54	19	420	10	432

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38535	2.16e-22	23	209	892	1085	Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P38536	6.37e-20	38	205	1684	1855	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
C6CRV0	2.57e-16	43	204	1291	1458	Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
Q06852	3.29e-15	51	201	2098	2260	Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2
Q06853	5.82e-13	51	201	478	634	Cell surface glycoprotein 2 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=Cthe_3079 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000377	0.998710	0.000332	0.000198	0.000202	0.000163

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000476_00587.