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CAZyme Information: MGYG000000350_00392

You are here: Home > Sequence: MGYG000000350_00392

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; ;
CAZyme ID MGYG000000350_00392
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
545 59516.13 4.45
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000350 1589625 MAG Sweden Europe
Gene Location Start: 7;  End: 1644  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000350_00392.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 190 525 2.2e-38 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 9.63e-17 162 418 82 363
Polygalacturonase [Carbohydrate transport and metabolism].
pfam12708 Pectate_lyase_3 1.20e-05 164 261 3 88
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWV34615.1 3.05e-152 49 538 33 515
CQR58237.1 8.60e-152 49 538 33 515
QQZ61515.1 1.72e-151 49 538 33 515
QUL57088.1 7.08e-151 49 538 34 516
ACX65654.1 5.31e-104 51 539 64 557

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 1.39e-08 163 414 45 320
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999396 0.000572 0.000077 0.000001 0.000000 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000350_00392.