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CAZyme Information: MGYG000000338_01651

You are here: Home > Sequence: MGYG000000338_01651

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Anaerobiospirillum sp900543125
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Succinivibrionaceae; Anaerobiospirillum; Anaerobiospirillum sp900543125
CAZyme ID MGYG000000338_01651
CAZy Family PL9
CAZyme Description Pectate disaccharide-lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
185 20350.32 6.0923
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000338 3410865 MAG Sweden Europe
Gene Location Start: 236;  End: 793  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.9

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 1 182 9e-48 0.5013333333333333

CDD Domains      help

MGYG000000338_01651 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUY25975.1 2.75e-61 1 146 537 681
AUX94129.1 2.00e-60 1 146 536 680
VDZ60871.1 3.68e-60 1 147 311 456
ALX97327.1 5.42e-59 1 147 533 678
QIP90283.1 5.81e-59 1 147 538 683

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.77e-17 1 182 190 368
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 1.10e-50 1 146 544 688
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6 7.78e-17 1 182 215 393
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 1.06e-16 1 182 215 393
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000338_01651.