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CAZyme Information: MGYG000000246_00263

You are here: Home > Sequence: MGYG000000246_00263

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus pasteurianus
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pasteurianus
CAZyme ID MGYG000000246_00263
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
592 MGYG000000246_1|CGC8 69610.31 6.5092
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000246 2159802 Isolate China Asia
Gene Location Start: 277872;  End: 279650  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000246_00263.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3754 RgpF 0.0 1 586 1 594
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
pfam05045 RgpF 0.0 34 518 1 501
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAD0174269.1 3.86e-296 1 585 1 580
CAD0177986.1 3.86e-296 1 585 1 580
ALX91647.1 3.86e-296 1 585 1 580
QBS00199.1 3.86e-296 1 585 1 580
CAD0164329.1 3.86e-296 1 585 1 580

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000246_00263.