CAZyme Information: MGYG000000222_02938

Basic Information

• Species: Parabacteroides sp003473295
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp003473295
• CAZyme ID: MGYG000000222_02938
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
645	MGYG000000222_29|CGC1	73242.23	5.1742

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000222	4189286	Isolate	China	Asia

• Gene Location: Start: 21050; End: 22987 Strand: -

Full Sequence      

MKSSLFNLFLSLSIGVSVVACTTDTKVIHFDSSREMSGGKIAICDLNPSMPEDWEGYNYV
VVEMKVSTSQRFFLGFNTSHGYDEVRIHSYVPGQWNRLAIPVRFFSQPPASAVDMAATYN
QPRYTGWINIGGNTGPMTGVDSIGARMRAPIGNQSIEIRNIELAVEDPGDAYLGDKPALD
EFGQSNLVDYDGKVHTLKDLQAAWQAEEQEKVSEEELYGYSKYGGYKAHQVKATGFFRTE
CIDGRWWFVDPEGYLFLSVGVDCVYNSGGGSVRNVERRDGMLKQLPPEKFIRHTDSRDGM
VANYDQWNLERRYGEDSFKAAAEMTFKRMDKWGVNTIGNWSDRRLEQMNRKAFTCTMHPA
GIAADLMGLGDVYEANFMQELEQSLRRSVEPNRDNPWLIGYFVGNEPVWVGQEQRVCQLI
LDGRDRAIKTALQQYLTANGDTPEVRKDFVYDSFRRYIEAVKEMQLKLDPNHLNLGYRFG
DIHAVKGELLSICSQVFDVISFNCYALAPDKAMMDRVFKESGLPMIIGEFHFGSVDRGQG
QSLWQVDSQRERGVAYRYYVENGYSHPALIGTAYFTWNDQDILGRMDGENYNCGCIDVTN
RPYREQTEAMMASARQLYAIHAGKEAPYSERPVRARGHDHGPDEW

Enzyme Prediction     

No EC number prediction in MGYG000000222_02938.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	141	618	7.2e-86	0.8284839203675345

CDD Domains     

MGYG000000222_02938 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SCM56829.1	1.63e-279	16	645	14	644
AXP07832.1	4.37e-277	1	645	1	643
BBE17136.1	4.02e-266	28	645	53	665
AHF13634.1	2.63e-249	1	645	1	645
ASB49335.1	1.51e-228	21	645	21	644

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4BQ2_A	5.86e-49	137	625	163	750	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	1.47e-48	137	625	163	750	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5Z6P_A	6.87e-41	179	618	223	759	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
6XJ9_A	1.79e-39	137	618	182	759	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5T3B_A	7.41e-18	207	610	70	465	ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	3.50e-42	147	620	401	951	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839	1.69e-30	180	635	400	930	Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000777	0.151803	0.847144	0.000083	0.000101	0.000101

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000222_02938.