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CAZyme Information: MGYG000000209_01629
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Eubacterium_F sp003491505 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_F; Eubacterium_F sp003491505 | |||||||||||
| CAZyme ID | MGYG000000209_01629 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 51929; End: 59887 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 1.97e-74 | 1196 | 1717 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 8.73e-27 | 1812 | 2047 | 397 | 635 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| smart00487 | DEXDc | 4.54e-08 | 1661 | 1764 | 7 | 110 | DEAD-like helicases superfamily. |
| COG0827 | YtxK | 2.83e-07 | 1036 | 1173 | 211 | 341 | Adenine-specific DNA methylase [Replication, recombination and repair]. |
| cd18011 | DEXDc_RapA | 3.31e-07 | 1663 | 1722 | 1 | 62 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 0.0 | 897 | 2466 | 1545 | 3186 |
| QIW86704.1 | 0.0 | 897 | 2466 | 1613 | 3254 |
| QIW86628.1 | 0.0 | 897 | 2466 | 1613 | 3254 |
| AXF51455.1 | 0.0 | 900 | 2466 | 1782 | 3423 |
| AEY69616.1 | 1.03e-318 | 900 | 2466 | 1689 | 3330 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 1.33e-36 | 919 | 2249 | 51 | 1567 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000046 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |