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CAZyme Information: MGYG000000161_00317
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lactobacillus amylovorus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus amylovorus | |||||||||||
| CAZyme ID | MGYG000000161_00317 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 33252; End: 38279 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13402 | LT_TF-like | 3.40e-37 | 1451 | 1561 | 1 | 115 | lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
| pfam00877 | NLPC_P60 | 1.48e-24 | 1278 | 1376 | 1 | 99 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| COG3953 | SLT | 7.01e-20 | 1440 | 1578 | 4 | 154 | SLT domain protein [Mobilome: prophages, transposons]. |
| NF033741 | NlpC_p60_RipA | 3.56e-18 | 1278 | 1368 | 340 | 442 | NlpC/P60 family peptidoglycan endopeptidase RipA. |
| PRK13914 | PRK13914 | 1.15e-17 | 1255 | 1354 | 356 | 457 | invasion associated endopeptidase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QLK33432.1 | 0.0 | 1 | 1675 | 1 | 1675 |
| QXL48446.1 | 8.10e-188 | 133 | 1591 | 248 | 1767 |
| QTP20241.1 | 9.59e-183 | 133 | 1556 | 248 | 1722 |
| ART97440.1 | 2.33e-180 | 133 | 1591 | 248 | 1768 |
| QTP20680.1 | 1.45e-176 | 4 | 1675 | 3 | 1672 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2XIV_A | 4.83e-13 | 1278 | 1379 | 92 | 208 | Structureof Rv1477, hypothetical invasion protein of Mycobacterium tuberculosis [Mycobacterium tuberculosis H37Rv] |
| 4XCM_A | 5.02e-13 | 1278 | 1355 | 126 | 205 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 3PBC_A | 9.78e-13 | 1278 | 1379 | 97 | 213 | ChainA, Invasion Protein [Mycobacterium tuberculosis] |
| 3NE0_A | 9.78e-13 | 1278 | 1379 | 97 | 213 | Structureand functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation [Mycobacterium tuberculosis H37Rv] |
| 4Q4T_A | 8.99e-12 | 1278 | 1379 | 355 | 471 | Structureof the Resuscitation Promoting Factor Interacting protein RipA mutated at E444 [Mycobacterium tuberculosis H37Rv] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q01839 | 2.72e-12 | 1278 | 1354 | 421 | 500 | Probable endopeptidase p60 OS=Listeria welshimeri OX=1643 GN=iap PE=3 SV=1 |
| Q01836 | 2.96e-12 | 1278 | 1354 | 364 | 443 | Probable endopeptidase p60 OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=iap PE=3 SV=2 |
| P21171 | 3.16e-12 | 1278 | 1354 | 381 | 460 | Probable endopeptidase p60 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=iap PE=1 SV=2 |
| Q01838 | 3.58e-12 | 1278 | 1354 | 420 | 499 | Probable endopeptidase p60 OS=Listeria seeligeri OX=1640 GN=iap PE=3 SV=1 |
| Q01837 | 3.59e-12 | 1278 | 1354 | 421 | 500 | Probable endopeptidase p60 OS=Listeria ivanovii OX=1638 GN=iap PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000047 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |