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CAZyme Information: MGYG000000138_00579

You are here: Home > Sequence: MGYG000000138_00579

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides johnsonii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides johnsonii
CAZyme ID MGYG000000138_00579
CAZy Family GH2
CAZyme Description Beta-galactosidase BoGH2A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
816 92999.86 6.6273
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000138 4917599 Isolate United Kingdom Europe
Gene Location Start: 251339;  End: 253789  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000138_00579.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 23 622 2.1e-111 0.6103723404255319

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 7.49e-73 23 633 11 613
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 3.89e-47 26 411 43 449
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02837 Glyco_hydro_2_N 3.90e-46 28 174 5 166
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10150 PRK10150 5.42e-39 86 437 68 446
beta-D-glucuronidase; Provisional
PRK09525 lacZ 3.11e-33 28 411 56 462
beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQY42844.1 0.0 22 815 20 815
ALK86697.1 0.0 22 815 20 815
ABR38109.1 0.0 22 815 20 815
QQY39584.1 0.0 22 815 20 815
QUT56573.1 0.0 22 815 20 815

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GM8_A 0.0 22 816 4 800
ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482]
5T98_A 1.76e-154 21 814 24 820
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
7CWD_A 1.05e-146 25 807 4 794
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
4YPJ_A 3.02e-144 25 794 10 787
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
5T9A_A 1.58e-134 27 814 32 845
Crystalstructure of BuGH2Cwt [Bacteroides uniformis],5T9A_B Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_C Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_D Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9G_A Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_B Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_C Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_D Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KM09 1.82e-176 27 815 51 820
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
A7LXS9 4.76e-163 27 813 47 847
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
T2KN75 5.21e-73 27 754 31 737
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
P77989 2.24e-69 23 759 4 695
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
T2KPJ7 7.39e-68 28 698 57 714
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001923 0.997129 0.000310 0.000206 0.000201 0.000208

TMHMM  Annotations      download full data without filtering help

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