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CAZyme Information: MGYG000000095_01842
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | GCA-900066755 sp902363085 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; GCA-900066755; GCA-900066755 sp902363085 | |||||||||||
| CAZyme ID | MGYG000000095_01842 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 17343; End: 19151 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 5.30e-29 | 159 | 417 | 18 | 244 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| cd14256 | Dockerin_I | 3.34e-20 | 540 | 596 | 1 | 57 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
| pfam00404 | Dockerin_1 | 1.63e-13 | 541 | 596 | 1 | 56 | Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium. |
| pfam08239 | SH3_3 | 2.50e-13 | 53 | 104 | 2 | 54 | Bacterial SH3 domain. |
| smart00287 | SH3b | 1.67e-11 | 41 | 104 | 1 | 61 | Bacterial SH3 domain homologues. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ANU49989.1 | 2.75e-130 | 14 | 547 | 13 | 705 |
| QQR01104.1 | 2.75e-130 | 14 | 547 | 13 | 705 |
| QJU23484.1 | 4.54e-130 | 14 | 548 | 13 | 713 |
| CCO04280.1 | 4.15e-129 | 39 | 571 | 21 | 554 |
| ASN95383.1 | 2.69e-128 | 14 | 548 | 13 | 713 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FXO_A | 2.59e-16 | 195 | 417 | 36 | 243 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 2KRS_A | 3.45e-08 | 44 | 111 | 3 | 65 | SolutionNMR structure of SH3 domain from CPF_0587 (fragment 415-479) from Clostridium perfringens. Northeast Structural Genomics Consortium (NESG) Target CpR74A. [Clostridium perfringens] |
| 2KQ8_A | 1.34e-06 | 54 | 98 | 12 | 55 | ChainA, Cell wall hydrolase [[Bacillus thuringiensis] serovar konkukian] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39848 | 1.16e-18 | 196 | 417 | 679 | 879 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| Q8CPQ1 | 4.03e-17 | 195 | 417 | 1127 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
| O33635 | 9.27e-17 | 195 | 417 | 1127 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q5HQB9 | 9.27e-17 | 195 | 417 | 1127 | 1334 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| Q5HH31 | 1.74e-14 | 195 | 417 | 1048 | 1255 | Bifunctional autolysin OS=Staphylococcus aureus (strain COL) OX=93062 GN=atl PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000004 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
