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CAZyme Information: MGYG000000094_00276
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp902363125 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp902363125 | |||||||||||
| CAZyme ID | MGYG000000094_00276 | |||||||||||
| CAZy Family | CBM13 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 298843; End: 300660 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM13 | 225 | 352 | 1.7e-20 | 0.6170212765957447 |
| CBM13 | 318 | 414 | 3.5e-18 | 0.4946808510638298 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam13529 | Peptidase_C39_2 | 2.13e-21 | 424 | 577 | 2 | 138 | Peptidase_C39 like family. |
| pfam14200 | RicinB_lectin_2 | 5.51e-21 | 310 | 398 | 2 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| pfam14200 | RicinB_lectin_2 | 9.29e-18 | 270 | 350 | 10 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| NF035929 | lectin_1 | 3.40e-17 | 183 | 409 | 624 | 835 | lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor. |
| pfam14200 | RicinB_lectin_2 | 1.98e-16 | 214 | 303 | 3 | 89 | Ricin-type beta-trefoil lectin domain-like. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRT49575.1 | 2.52e-167 | 17 | 605 | 465 | 1061 |
| BAK44091.1 | 1.81e-49 | 27 | 415 | 490 | 885 |
| QRT49576.1 | 1.26e-41 | 27 | 332 | 619 | 928 |
| QRT50581.1 | 1.32e-19 | 129 | 332 | 126 | 341 |
| AXM90834.1 | 2.02e-19 | 89 | 332 | 370 | 624 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5B2H_A | 7.60e-09 | 181 | 313 | 147 | 278 | Crystalstructure of HA33 from Clostridium botulinum serotype C strain Yoichi [Clostridium botulinum],5B2H_B Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi [Clostridium botulinum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O34735 | 5.08e-09 | 419 | 605 | 59 | 249 | Uncharacterized protein YvpB OS=Bacillus subtilis (strain 168) OX=224308 GN=yvpB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000048 | 0.000007 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |