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CAZyme Information: MGYG000000090_00890
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lawsonibacter sp014287875 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Lawsonibacter; Lawsonibacter sp014287875 | |||||||||||
| CAZyme ID | MGYG000000090_00890 | |||||||||||
| CAZy Family | CBM54 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 18123; End: 23102 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM54 | 201 | 316 | 4.9e-17 | 0.956140350877193 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00395 | SLH | 2.43e-09 | 155 | 197 | 1 | 42 | S-layer homology domain. |
| pfam00395 | SLH | 2.45e-07 | 94 | 135 | 1 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 5.89e-07 | 43 | 205 | 590 | 752 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| NF033190 | inl_like_NEAT_1 | 2.99e-04 | 94 | 201 | 582 | 687 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 0.003 | 38 | 76 | 4 | 42 | S-layer homology domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCK84769.1 | 0.0 | 12 | 1649 | 14 | 1646 |
| QIA32369.1 | 0.0 | 12 | 1648 | 7 | 1622 |
| QQR07714.1 | 0.0 | 12 | 1648 | 7 | 1622 |
| QQR30851.1 | 3.46e-229 | 15 | 1625 | 10 | 1770 |
| ASB41592.1 | 3.46e-229 | 15 | 1625 | 10 | 1770 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5GZT_A | 6.05e-07 | 189 | 272 | 28 | 108 | CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P38536 | 3.01e-17 | 42 | 201 | 1688 | 1851 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
| P38537 | 7.49e-17 | 39 | 205 | 38 | 206 | Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1 |
| P19424 | 1.13e-16 | 39 | 205 | 45 | 214 | Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1 |
| P38535 | 1.62e-16 | 42 | 201 | 914 | 1077 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| Q06852 | 7.86e-14 | 57 | 205 | 2104 | 2264 | Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000502 | 0.998767 | 0.000208 | 0.000170 | 0.000160 | 0.000154 |
