CAZyme Information: MGYG000000078_02120

Basic Information

• Species: Lachnospira rogosae_A
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira rogosae_A
• CAZyme ID: MGYG000000078_02120
• CAZy Family: CBM48
• CAZyme Description: 1,4-alpha-glucan branching enzyme GlgB

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
820	MGYG000000078_7|CGC1	93684.71	4.7737

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000078	3032544	Isolate	United Kingdom	Europe

• Gene Location: Start: 107175; End: 109637 Strand: -

Full Sequence      

MDNKLYKLMDWPAIEEIVYSESSQPCSILGGHLVKEGYLIQVFRPDAVSVSVSVSERKRA
IQLEKVDDAGFFAALIPIKKNVKYVLNIEDKNGHITRLRDPYSFGRFDKSEVIFNKFAAG
TEYNAYNLLGNKVCEKDGISGVLFRTWAPNALRVSVVGEFNSWDGRIYQMERITDNGIYE
IFIPQLEAGQEYMYEIKFKGTNTVLKLDPYARQITQYADAHSVTGEPQAVQDNVKWVKQR
KQIKGVNKPLSILEIAYDNIPVNKAKVNYMDIARYITEYVKDTGYTYVLIKGSDSIFEKT
GYCYGASGYYAPSSQYGTATDFKHMIKELHNNGIGVIIDFNVAYFGIDIRSIVNYDGGDC
YGYLKPRIIEKPQMNITTFAYEKGEVRSFLISAIAMWLDEYNIDGIKITDTATMLYLDYG
KNPGEWTPNMYGGNENLDAIEFIKQMNEYVHKRNDGVITIADEKSLWSDVTRNNDNEDSL
GFDYKLNDGFNEEFFEFVKQDPLFRKGMYNRVTYEMLYHYKEHFITNLTYEALKDDTLYA
MVSGNDDKQRLSDIRAVLGYIYTYPGPVCVSYGNDTGALVSVDDDKMQILSRLEEPAYKQ
MKAYIKALNTLYTTDNSMYEADSSSDGFEWVDNYNAELTVYSYARYSSDNDMDIVAVNFT
PVERKAYELNVPKAGKYKLVFNSDNEEYGGDGKVEAVVVKSAVEADSNDRYKMFVDIPAS
AMVVYKYEPYTDIEIKEIQIKNEAKAAKVEAEKRVDLARELADKAEEEAVRAANAEKEAK
ESLRLAQNARKEAEKKALEAVKESERIDEEMKLRLSQLKK

Enzyme Prediction     

No EC number prediction in MGYG000000078_02120.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH13	278	576	1.2e-77	0.9900332225913622
CBM48	139	215	3.4e-16	0.8289473684210527

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK05402	PRK05402	3.56e-179	13	729	5	725	1,4-alpha-glucan branching protein GlgB.
PRK12313	PRK12313	2.75e-157	117	729	15	629	1,4-alpha-glucan branching protein GlgB.
COG0296	GlgB	1.15e-113	117	727	14	628	1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK14706	PRK14706	4.40e-110	127	747	25	639	glycogen branching enzyme; Provisional
PRK14705	PRK14705	9.37e-110	9	718	503	1213	glycogen branching enzyme; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ACR71776.1	2.04e-214	1	772	1	742
QIB58408.1	3.12e-169	1	727	1	732
QMW77842.1	3.12e-169	1	727	1	732
QBE99030.1	1.14e-168	1	727	1	732
QQQ92601.1	2.54e-168	1	727	1	732

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GQW_A	2.62e-117	14	729	30	775	Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
6KLF_A	3.87e-117	14	729	6	751	ChainA, 1,4-alpha-glucan branching enzyme GlgB [Crocosphaera subtropica ATCC 51142]
5GR5_A	7.20e-117	14	729	30	775	Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A	1.41e-116	14	729	30	775	Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GQZ_A	1.41e-116	14	729	30	775	Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q608L5	6.86e-128	12	690	12	689	1,4-alpha-glucan branching enzyme GlgB OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=glgB PE=3 SV=1
Q3JCN0	3.41e-127	13	726	18	731	1,4-alpha-glucan branching enzyme GlgB OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=glgB PE=3 SV=1
B3PGN4	1.03e-125	17	690	17	699	1,4-alpha-glucan branching enzyme GlgB OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=glgB PE=3 SV=1
Q8DLB8	2.23e-125	14	690	8	713	1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
Q1AZ86	2.03e-124	13	692	6	685	1,4-alpha-glucan branching enzyme GlgB OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000045	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000078_02120.