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CAZyme Information: MGYG000000054_00254

You are here: Home > Sequence: MGYG000000054_00254

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
CAZyme ID MGYG000000054_00254
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
730 80669.3 4.502
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000054 5213730 Isolate United Kingdom Europe
Gene Location Start: 136229;  End: 138421  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 463 725 3.9e-44 0.6798679867986799

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 4.12e-29 463 723 54 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 1.01e-28 463 725 96 310
Glycosyl hydrolase family 10.
COG3693 XynA 3.33e-20 461 730 117 344
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 1.66e-10 52 135 1 85
Glycosyl hydrolase family 10.
COG3693 XynA 2.03e-07 54 164 27 133
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK67953.1 0.0 1 730 3 754
QUT32420.1 0.0 7 730 1 746
QRN02128.1 0.0 7 730 1 746
QDM11106.1 1.06e-279 1 727 1 725
QIU93949.1 3.13e-279 1 727 1 725

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MGQ_A 8.17e-25 140 303 4 157
PbXyn10CCBM APO [Prevotella bryantii B14]
1US3_A 4.93e-13 484 729 291 515
Nativexylanase10C from Cellvibrio japonicus [Cellvibrio japonicus]
1US2_A 2.62e-12 484 729 291 515
Xylanase10C(mutant E385A) from Cellvibrio japonicus in complex with xylopentaose [Cellvibrio japonicus]
1W32_A 3.73e-11 484 730 118 348
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W32_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1W3H_A 4.01e-11 484 730 129 359
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W3H_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59675 3.13e-12 484 729 375 599
Endo-beta-1,4-xylanase Xyn10C OS=Cellvibrio japonicus OX=155077 GN=xyn10C PE=1 SV=2
P14768 6.04e-10 484 730 381 611
Endo-1,4-beta-xylanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=xynA PE=1 SV=2
O69230 1.39e-09 448 725 460 709
Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1
P07528 2.49e-08 461 691 162 357
Endo-1,4-beta-xylanase A OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=xynA PE=1 SV=1
C6CRV0 3.96e-08 450 725 611 850
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000224 0.258303 0.741138 0.000105 0.000125 0.000103

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000054_00254.