dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003637_504|CGC1
Gene ID: MGYG000003637_01709
Location and strand information: 1235 - 2524 (-)
Family: 3.A.1.125.5
Protein type: TC
Protein description: Lipoprotein-releasing system transmembrane protein LolE

Gene clsuter ID: MGYG000003637_504|CGC1
Gene ID: MGYG000003637_01710
Location and strand information: 2634 - 4262 (-)
Family: null
Protein type: null
Protein description: Lysine--tRNA ligase

Gene clsuter ID: MGYG000003637_504|CGC1
Gene ID: MGYG000003637_01711
Location and strand information: 4410 - 6677 (-)
Family: GH89
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0738
Protein molecular weight: 85287.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003637_504|CGC1
Gene ID: MGYG000003637_01712
Location and strand information: 6857 - 7453 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003637_504|CGC1
Gene ID: MGYG000003637_01713
Location and strand information: 7485 - 10145 (-)
Family: 1.B.33.1.3
Protein type: TC
Protein description: Outer membrane protein assembly factor BamA

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003637_01709	Lipoprotein-releasing system transmembrane protein LolE	TC	1235	2524	-	3.A.1.125.5
MGYG000003637_01710	Lysine--tRNA ligase	null	2634	4262	-	tRNA_anti-codon\| tRNA-synt_2
MGYG000003637_01711	hypothetical protein	CAZyme	4410	6677	-	GH89
MGYG000003637_01712	hypothetical protein	null	6857	7453	-	OmpH
MGYG000003637_01713	Outer membrane protein assembly factor BamA	TC	7485	10145	-	1.B.33.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature