dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00036
Location and strand information: 37999 - 38682 (+)
Family: 9.B.120.1.2
Protein type: TC
Protein description: putative membrane protein YdfK

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00037
Location and strand information: 38823 - 40550 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00038
Location and strand information: 40543 - 42162 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00039
Location and strand information: 42300 - 43931 (+)
Family: 3.A.1.1.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00040
Location and strand information: 44043 - 44945 (+)
Family: 3.A.1.1.9
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00041
Location and strand information: 44959 - 45825 (+)
Family: 3.A.1.1.9
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00042
Location and strand information: 45862 - 48450 (+)
Family: GH97|CBM35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0405
Protein molecular weight: 95657.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00043
Location and strand information: 48452 - 50545 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 6.0099
Protein molecular weight: 78392.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00044
Location and strand information: 50671 - 51681 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator DegA

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00045
Location and strand information: 51932 - 53263 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00046
Location and strand information: 53358 - 54350 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00047
Location and strand information: 54381 - 55259 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00048
Location and strand information: 55293 - 56387 (+)
Family: GH130
Protein type: CAZyme
Protein description: 4-O-beta-D-mannosyl-D-glucose phosphorylase
Protein isoelectric point: 5.0531
Protein molecular weight: 40770.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00049
Location and strand information: 56404 - 57354 (+)
Family: GT108
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7209
Protein molecular weight: 35263.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00050
Location and strand information: 57398 - 57883 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00051
Location and strand information: 58121 - 59215 (+)
Family: GT2
Protein type: CAZyme
Protein description: 4,4'-diaponeurosporenoate glycosyltransferase
Protein isoelectric point: 9.1974
Protein molecular weight: 40401.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00052
Location and strand information: 59212 - 59853 (+)
Family: null
Protein type: null
Protein description: Glycerol-3-phosphate acyltransferase

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00053
Location and strand information: 59973 - 60146 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00054
Location and strand information: 60295 - 62010 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00055
Location and strand information: 62146 - 63720 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00056
Location and strand information: 63974 - 64894 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00057
Location and strand information: 64955 - 65890 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00058
Location and strand information: 65966 - 67558 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00059
Location and strand information: 67914 - 69992 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BglY
Protein isoelectric point: 6.1063
Protein molecular weight: 78495.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00060
Location and strand information: 70057 - 71145 (-)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00061
Location and strand information: 71491 - 72393 (+)
Family: 3.A.1.1.7
Protein type: TC
Protein description: Trehalose transport system permease protein SugA

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00062
Location and strand information: 72410 - 73243 (+)
Family: 3.A.1.1.6
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00063
Location and strand information: 73275 - 74705 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00064
Location and strand information: 74723 - 76507 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-glucuronidase
Protein isoelectric point: 4.8304
Protein molecular weight: 69023.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00065
Location and strand information: 76504 - 78276 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.9277
Protein molecular weight: 69126.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00066
Location and strand information: 78481 - 79455 (+)
Family: GH43|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.1168
Protein molecular weight: 35850.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00067
Location and strand information: 79734 - 81482 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00068
Location and strand information: 81599 - 82570 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00069
Location and strand information: 82585 - 83517 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00070
Location and strand information: 83514 - 84941 (+)
Family: GH43_26|GH43|CBM35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8639
Protein molecular weight: 52200
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00071
Location and strand information: 85033 - 85971 (+)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_1|CGC1
Gene ID: MGYG000003359_00072
Location and strand information: 86204 - 87958 (+)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 4.9538
Protein molecular weight: 66989.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003359_00036	putative membrane protein YdfK	TC	37999	38682	+	9.B.120.1.2
MGYG000003359_00037	hypothetical protein	TC	38823	40550	+	8.A.59.2.1
MGYG000003359_00038	HTH-type transcriptional activator RhaR	TF	40543	42162	+	HTH_AraC+HTH_AraC
MGYG000003359_00039	hypothetical protein	TC	42300	43931	+	3.A.1.1.9
MGYG000003359_00040	putative multiple-sugar transport system permease YteP	TC	44043	44945	+	3.A.1.1.9
MGYG000003359_00041	Inner membrane ABC transporter permease protein YcjP	TC	44959	45825	+	3.A.1.1.9
MGYG000003359_00042	hypothetical protein	CAZyme	45862	48450	+	GH97\| CBM35
MGYG000003359_00043	Alpha-galactosidase AgaA	CAZyme	48452	50545	+	GH36
MGYG000003359_00044	HTH-type transcriptional regulator DegA	TF	50671	51681	-	LacI
MGYG000003359_00045	hypothetical protein	STP	51932	53263	+	SBP_bac_1
MGYG000003359_00046	Lactose transport system permease protein LacF	TC	53358	54350	+	3.A.1.1.11
MGYG000003359_00047	hypothetical protein	TC	54381	55259	+	3.A.1.1.11
MGYG000003359_00048	4-O-beta-D-mannosyl-D-glucose phosphorylase	CAZyme	55293	56387	+	GH130
MGYG000003359_00049	hypothetical protein	CAZyme	56404	57354	+	GT108
MGYG000003359_00050	hypothetical protein	null	57398	57883	-	DUF6803
MGYG000003359_00051	4,4'-diaponeurosporenoate glycosyltransferase	CAZyme	58121	59215	+	GT2
MGYG000003359_00052	Glycerol-3-phosphate acyltransferase	null	59212	59853	+	G3P_acyltransf
MGYG000003359_00053	hypothetical protein	null	59973	60146	+	No domain
MGYG000003359_00054	hypothetical protein	TC	60295	62010	+	9.B.33.1.1
MGYG000003359_00055	Regulator of RpoS	TF	62146	63720	+	HTH_AraC+HTH_AraC
MGYG000003359_00056	putative multiple-sugar transport system permease YteP	TC	63974	64894	+	3.A.1.1.10
MGYG000003359_00057	L-arabinose transport system permease protein AraQ	TC	64955	65890	+	3.A.1.1.29
MGYG000003359_00058	hypothetical protein	null	65966	67558	+	DUF3502
MGYG000003359_00059	Beta-galactosidase BglY	CAZyme	67914	69992	+	GH42
MGYG000003359_00060	Arabinose metabolism transcriptional repressor	TF	70057	71145	-	GntR
MGYG000003359_00061	Trehalose transport system permease protein SugA	TC	71491	72393	+	3.A.1.1.7
MGYG000003359_00062	Inner membrane ABC transporter permease protein YcjP	TC	72410	73243	+	3.A.1.1.6
MGYG000003359_00063	hypothetical protein	STP	73275	74705	+	SBP_bac_1
MGYG000003359_00064	Beta-glucuronidase	CAZyme	74723	76507	+	GH2
MGYG000003359_00065	Beta-galactosidase	CAZyme	76504	78276	+	GH2
MGYG000003359_00066	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	78481	79455	+	GH43\| GH43_26
MGYG000003359_00067	hypothetical protein	null	79734	81482	+	SBP_bac_8
MGYG000003359_00068	putative multiple-sugar transport system permease YteP	TC	81599	82570	+	3.A.1.1.10
MGYG000003359_00069	L-arabinose transport system permease protein AraQ	TC	82585	83517	+	3.A.1.1.10
MGYG000003359_00070	hypothetical protein	CAZyme	83514	84941	+	GH43_26\| GH43\| CBM35
MGYG000003359_00071	hypothetical protein	TF	85033	85971	+	HTH_5
MGYG000003359_00072	Evolved beta-galactosidase subunit alpha	CAZyme	86204	87958	+	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature