dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04198
Location and strand information: 15869 - 18391 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7045
Protein molecular weight: 95399.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04199
Location and strand information: 18411 - 21224 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1692
Protein molecular weight: 105428.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04200
Location and strand information: 21231 - 22679 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7407
Protein molecular weight: 53287.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04201
Location and strand information: 22860 - 24317 (+)
Family: null
Protein type: null
Protein description: L-Rhamnulokinase

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04202
Location and strand information: 24382 - 25635 (+)
Family: null
Protein type: null
Protein description: L-rhamnose isomerase

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04203
Location and strand information: 25734 - 26765 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04204
Location and strand information: 26861 - 27670 (+)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04205
Location and strand information: 27726 - 29024 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0578
Protein molecular weight: 49770.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04206
Location and strand information: 29153 - 30079 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001780_46|CGC1
Gene ID: MGYG000001780_04207
Location and strand information: 30253 - 32634 (+)
Family: 1.B.14.3.1
Protein type: TC
Protein description: Vitamin B12 transporter BtuB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001780_04198	hypothetical protein	CAZyme	15869	18391	+	GH105
MGYG000001780_04199	hypothetical protein	CAZyme	18411	21224	+	GH106
MGYG000001780_04200	hypothetical protein	CAZyme	21231	22679	+	GH28
MGYG000001780_04201	L-Rhamnulokinase	null	22860	24317	+	FGGY_N\| FGGY_C
MGYG000001780_04202	L-rhamnose isomerase	null	24382	25635	+	RhaA
MGYG000001780_04203	L-rhamnose-proton symporter	TC	25734	26765	+	2.A.7.6.1
MGYG000001780_04204	Rhamnulose-1-phosphate aldolase	null	26861	27670	+	Aldolase_II
MGYG000001780_04205	hypothetical protein	CAZyme	27726	29024	+	GH105
MGYG000001780_04206	HTH-type transcriptional activator RhaS	TF	29153	30079	+	HTH_AraC+HTH_AraC
MGYG000001780_04207	Vitamin B12 transporter BtuB	TC	30253	32634	+	1.B.14.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature