Browse dbCAN-PUL Entries
| PULID |
Characterization Method(s) |
Substrate |
Organism |
Publication |
Publish Date |
Type |
Num Genes |
Num CAZymes |
CazyFamily |
| PUL0608 |
enzyme activity assay,
clone and expression,
liquid chromatography and mass spectrometry,
thin-layer chromatography,
MALDI-TOF/MS
|
human milk oligosaccharide
|
Roseburia hominis DSM 16839 |
<a href=https://pubmed.ncbi.nlm.nih.gov/32620774/>32620774</a>
Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways. Nat Commun. 2020 Jul 3;11(1):3285. doi: 10.1038/s41467-020-17075-x. |
2020 Jul 3 |
degradation |
9 |
2 |
GH112,
GH136
|
| PUL0609 |
enzyme activity assay,
clone and expression,
liquid chromatography and mass spectrometry,
thin-layer chromatography,
MALDI-TOF/MS
|
human milk oligosaccharide
|
Roseburia inulinivorans DSM 16841 |
<a href=https://pubmed.ncbi.nlm.nih.gov/32620774/>32620774</a>
Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways. Nat Commun. 2020 Jul 3;11(1):3285. doi: 10.1038/s41467-020-17075-x. |
2020 Jul 3 |
degradation |
11 |
4 |
GH112,
GH136,
CBM32,
GH95
|
| PUL0793 |
enzyme activity assay,
quantification of reaction product reducing ends,
RNA-seq,
differential gene expression,
NMR,
MALDI-TOF/MS,
gas chromatography,
mass spectrometry,
bicinchoninic acid (BCA) assay,
recombinant protein expression
|
arabinan
|
Bacteroides intestinalis DSM 17393 |
<a href=https://pubmed.ncbi.nlm.nih.gov/39443715/>39443715</a>
In vivo manipulation of human gut Bacteroides fitness by abiotic oligosaccharides. Nat Chem Biol. 2025 Apr;21(4):544-554. doi: 10.1038/s41589-024-01763-6. Epub 2024 Oct 23. |
2025 Apr |
degradation |
14 |
6 |
CE1,
GH127,
GH146,
GH43_34,
CBM32,
GH97
|
| PUL0794 |
enzyme activity assay,
quantification of reaction product reducing ends,
RNA-seq,
differential gene expression,
NMR,
MALDI-TOF/MS,
gas chromatography,
mass spectrometry,
bicinchoninic acid (BCA) assay,
recombinant protein expression
|
arabinan
|
Bacteroides intestinalis DSM 17393 |
<a href=https://pubmed.ncbi.nlm.nih.gov/39443715/>39443715</a>
In vivo manipulation of human gut Bacteroides fitness by abiotic oligosaccharides. Nat Chem Biol. 2025 Apr;21(4):544-554. doi: 10.1038/s41589-024-01763-6. Epub 2024 Oct 23. |
2025 Apr |
degradation |
23 |
8 |
GH146,
GH28,
GH43_29,
GH43_4,
GH51_1,
GH51_2,
GH97
|
