| PULID | Characterization Method(s) | Substrate | Organism | Publication | Publish Date | Type | Num Genes | Num CAZymes | CazyFamily |
|---|---|---|---|---|---|---|---|---|---|
| PUL0365 | RT-PCR | starch | Xanthomonas campestris pv. campestris | <a href=https://pubmed.ncbi.nlm.nih.gov/17311090/>17311090</a> Plant carbohydrate scavenging through tonB-dependent receptors: a feature shared by phytopathogenic and aquatic bacteria. PLoS One. 2007 Feb 21;2(2):e224. doi: 10.1371/journal.pone.0000224. |
2007 Feb 21 | degradation | 8 | 4 | GH13_2, GH13_23, GH78, GH97 |
| PUL0371 | enzyme activity assay | starch | Thermococcus sp. B1001 | <a href=https://pubmed.ncbi.nlm.nih.gov/11489857/>11489857</a> Extracellular synthesis, specific recognition, and intracellular degradation of cyclomaltodextrins by the hyperthermophilic archaeon Thermococcus sp. strain B1001. J Bacteriol. 2001 Sep;183(17):5050-7. doi: 10.1128/JB.183.17.5050-5057.2001. |
2001 Sep | degradation | 5 | 2 | CBM34, GH13_20, GH13_2, CBM20 |
| PUL0454 | SDS-PAGE, protein fingerprinting (MALDI-TOF PMF) | alpha-glucan | Actinoplanes sp. SE50/110 | <a href=https://pubmed.ncbi.nlm.nih.gov/22944206/>22944206</a> The cytosolic and extracellular proteomes of Actinoplanes sp. SE50/110 led to the identification of gene products involved in acarbose metabolism. J Biotechnol. 2013 Aug 20;167(2):178-89. doi: 10.1016/j.jbiotec.2012.08.011. Epub 2012 Aug 31. |
2013 Aug 20 | biosynthesis | 22 | 6 | GH13_13, CBM41, CBM41, GH13_2, CBM20, GH77, GT5 |
| PUL0593 | Northern Blot | starch | Thermoanaerobacterium thermosulfurigenes | <a href=https://pubmed.ncbi.nlm.nih.gov/8576036/>8576036</a> Molecular analysis of the amy gene locus of Thermoanaerobacterium thermosulfurigenes EM1 encoding starch-degrading enzymes and a binding protein-dependent maltose transport system. J Bacteriol. 1996 Feb;178(4):1039-46. doi: 10.1128/jb.178.4.1039-1046.1996. |
1996 Feb | degradation | 6 | 2 | CBM34, GH13_39, CBM20, GH13_2, CBM20 |
| PUL0719 | RNA-seq, growth assay | starch | Xanthomonas citri pv. citri str. 306 | <a href=https://pubmed.ncbi.nlm.nih.gov/37855631/>37855631</a> Plant structural and storage glucans trigger distinct transcriptional responses that modulate the motility of Xanthomonas pathogens. Microbiol Spectr. 2023 Dec 12;11(6):e0228023. doi: 10.1128/spectrum.02280-23. Epub 2023 Oct 19. |
2023 Dec 12 | degradation | 7 | 3 | GH13_2, GH13_23, GH97 |
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