Browse dbCAN-PUL Entries
| PULID | Characterization Method(s) | Substrate | Organism | Publication | Publish Date | Type | Num Genes | Num CAZymes | CazyFamily |
|---|---|---|---|---|---|---|---|---|---|
| PUL0236 | proteome fractionation, mass spectrometry, target decoy database analysis | alpha-glucan | Gramella forsetii | 24522261 Functional characterization of polysaccharide utilization loci in the marine Bacteroidetes 'Gramella forsetii' KT0803. ISME J. 2014 Jul;8(7):1492-502. doi: 10.1038/ismej.2014.4. Epub 2014 Feb 13. |
2014 Jul | degradation | 13 | 4 | GH13, GH13_46, GH13_7, GH65 |
| PUL0454 | SDS-PAGE, protein fingerprinting (MALDI-TOF PMF) | alpha-glucan | Actinoplanes sp. SE50/110 | 22944206 The cytosolic and extracellular proteomes of Actinoplanes sp. SE50/110 led to the identification of gene products involved in acarbose metabolism. J Biotechnol. 2013 Aug 20;167(2):178-89. doi: 10.1016/j.jbiotec.2012.08.011. Epub 2012 Aug 31. |
2013 Aug 20 | biosynthesis | 22 | 6 | GH13_13, CBM41, CBM41, GH13_2, CBM20, GH77, GT5 |
| PUL0473 | growth assay | alpha-glucan | Flavobacterium johnsoniae | 19717629 Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis. Appl Environ Microbiol. 2009 Nov;75(21):6864-75. doi: 10.1128/AEM.01495-09. Epub 2009 Aug 28. |
2009 Nov | degradation | 8 | 3 | GH13, GH13, CBM26, GH97 |
| PUL0611 | liquid chromatography and mass spectrometry | alpha-glucan | Winogradskyella sp. isolate Bin3 | 32071270 Metagenomic and Metaproteomic Insights into Photoautotrophic and Heterotrophic Interactions in a Synechococcus Culture. mBio. 2020 Feb 18;11(1):e03261-19. doi: 10.1128/mBio.03261-19. |
2020 Feb 18 | degradation | 14 | 7 | CE1, GH13_19, GH13_38, GH13_46, GH31, GH65, GH97 |
| PUL0612 | liquid chromatography and mass spectrometry | alpha-glucan | Muricauda sp. isolate Bin2 | 32071270 Metagenomic and Metaproteomic Insights into Photoautotrophic and Heterotrophic Interactions in a Synechococcus Culture. mBio. 2020 Feb 18;11(1):e03261-19. doi: 10.1128/mBio.03261-19. |
2020 Feb 18 | degradation | 11 | 2 | GH13_38, GH65 |
| PUL0725 | NMR, clone and expression, enzyme kinetic analysis | alpha-glucan | Marinovum sp. | 38180643 A Broad-Spectrum alpha-Glucosidase of Glycoside Hydrolase Family 13 from Marinovum sp., a Member of the Roseobacter Clade. Appl Biochem Biotechnol. 2024 Sep;196(9):6059-6071. doi: 10.1007/s12010-023-04820-3. Epub 2024 Jan 5. |
2024 Sep | degradation | 9 | 1 | GH13_23 |
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