dbCAN-PUL
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Cite: NAR/gkaa742 2020

Browse dbCAN-PUL Entries

PULID Characterization Method(s) Substrate Organism Publication Publish Date Type Num Genes Num CAZymes CazyFamily
PUL0643 enzyme activity assay, liquid chromatography, high-performance anion-exchange chromatography, qRT-PCR, crystallization arabinoxylan Bacteroides intestinalis DSM 17393 33469030
Degradation of complex arabinoxylans by human colonic Bacteroidetes. Nat Commun. 2021 Jan 19;12(1):459. doi: 10.1038/s41467-020-20737-5.		 2021 Jan 19 degradation 12 7 CE1, CE6, CE1, GH3, GH43_17, GH43_2, CBM6, GH43_7, GH43_7
PUL0793 enzyme activity assay, quantification of reaction product reducing ends, RNA-seq, differential gene expression, NMR, MALDI-TOF/MS, gas chromatography, mass spectrometry, bicinchoninic acid (BCA) assay, recombinant protein expression arabinan Bacteroides intestinalis DSM 17393 39443715
In vivo manipulation of human gut Bacteroides fitness by abiotic oligosaccharides. Nat Chem Biol. 2025 Apr;21(4):544-554. doi: 10.1038/s41589-024-01763-6. Epub 2024 Oct 23.		 2025 Apr degradation 14 6 CE1, GH127, GH146, GH43_34, CBM32, GH97
PUL0794 enzyme activity assay, quantification of reaction product reducing ends, RNA-seq, differential gene expression, NMR, MALDI-TOF/MS, gas chromatography, mass spectrometry, bicinchoninic acid (BCA) assay, recombinant protein expression arabinan Bacteroides intestinalis DSM 17393 39443715
In vivo manipulation of human gut Bacteroides fitness by abiotic oligosaccharides. Nat Chem Biol. 2025 Apr;21(4):544-554. doi: 10.1038/s41589-024-01763-6. Epub 2024 Oct 23.		 2025 Apr degradation 23 8 GH146, GH28, GH43_29, GH43_4, GH51_1, GH51_2, GH97