LOCUS       AE014295                4292 bp    DNA     linear   BCT 31-JAN-2014
DEFINITION  Bifidobacterium longum NCC2705, complete genome.
ACCESSION   AE014295
VERSION     AE014295.3
DBLINK      BioProject: PRJNA328
            BioSample: SAMN02603675
KEYWORDS    .
SOURCE      Bifidobacterium longum NCC2705
  ORGANISM  Bifidobacterium longum NCC2705
            Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
            Bifidobacterium.
REFERENCE   1  (bases 1 to 4292)
  AUTHORS   Schell,M.A., Karmirantzou,M., Snel,B., Vilanova,D., Berger,B.,
            Pessi,G., Zwahlen,M.C., Desiere,F., Bork,P., Delley,M.,
            Pridmore,R.D. and Arigoni,F.
  TITLE     The genome sequence of Bifidobacterium longum reflects its
            adaptation to the human gastrointestinal tract
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (22), 14422-14427 (2002)
   PUBMED   12381787
REFERENCE   2  (bases 1 to 4292)
  AUTHORS   Schell,M.A., Karmirantzou,M., Snel,B., Vilanova,D., Berger,B.,
            Pessi,G., Zwahlen,M.-C., Desiere,F., Bork,P., Delley,M., Pridmore,D.
            and Arigoni,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) Bioscience, Nestle Research Center, P.O. Box
            44, Lausanne 26 1000, Switzerland
REFERENCE   3  (bases 1 to 4292)
  AUTHORS   Schell,M.A., Karmirantzou,M., Snel,B., Vilanova,D., Berger,B.,
            Pessi,G., Zwahlen,M.-C., Desiere,F., Bork,P., Delley,M., Pridmore,D.
            and Arigoni,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JAN-2005) Bioscience, Nestle Research Center, P.O. Box
            44, Lausanne 26 1000, Switzerland
  REMARK    Sequence update by submitter
COMMENT     On Jan 21, 2005 this sequence version replaced AE014295.2.
FEATURES             Location/Qualifiers
     source          1..4292
                     /organism="Bifidobacterium longum NCC2705"
                     /mol_type="genomic DNA"
                     /strain="NCC2705"
                     /db_xref="taxon:206672"
     gene            complement(1..2133)
                     /gene="bgaB"
                     /locus_tag="BL0259"
     CDS             complement(1..2133)
                     /gene="bgaB"
                     /locus_tag="BL0259"
                     /note="lactase; BgaB; COG family: beta-galactosidase;
                     PFAM_ID: Glyco_hydro_42"
                     /codon_start=1
                     /transl_table=11
                     /product="GH42"
                     /protein_id="AAN24101.1"
                     /translation="MTTHRAFRWPSLLTESGRGIAFGGDYNPDQWPEETLDEDIRLMGE
                     AGVNVVSLAIFSWDKIEPVEGAFTFEWLDHVIDRLGRAGIAVDLASATAAAPLWLYESH
                     PEVLPVDRYGHTVNAGSRQSWQPTSPVFKEYALRLCRRLAEHYKDNPYVTAWHMGNEYG
                     WNNRYDYSDNALAAFRTWCEAKYGTIDALNEAWGTAFWSQHVNSFDEVLLPRHMGGDAM
                     VNPSQQLDYERFGNDMLLDFYKAERDAIEQICPDKPFTTNFMVSTDQCVMNYAKWADEV
                     DFVSNDHYFHEGESHLDELACSDALMDSLALGKPWYVMEHSTSAVQWKPLNTRKRAGEL
                     MRDSLAHVAMGADAICFFQWRQSKSGAEAFHSAMLPHAGADSKVFRGVCELGKALKTLS
                     DAGLQGTELERAGTAILFSAESEWATRSETLPSMKLNHWHDVRDWYRGFLDAGLRADVV
                     PLAYDWTGYKTIVLPTVLSLSDEDVLRIADFAKAGGTVIVGYAAGLIDEHFHIGLGGYP
                     GAGNGLLRDMLGIRSEEFNILGEEAEGEPSEISLSNGLTTRLWQNDVTSVAADTTVLAS
                     YAGESAADWELERTPAITSRPYGNGTAIYVGCDLNRHDIAQLLKALGSRWQELSAQPTE
                     SGQTPTYPTTDPRILHTIRRSADGSTRFDFYLNRSNQPVAVNGIEGEPIIAYRCEADTT
                     GYTLNRNAILIAKASC"
     gene            complement(2320..3327)
                     /locus_tag="BL0260"
     CDS             complement(2320..3327)
                     /locus_tag="BL0260"
                     /note="COG family: sugar permeases; PFAM_ID: BPD_transp"
                     /codon_start=1
                     /transl_table=11
                     /product="gnl|TC-DB|D6ZW62|3.A.1.1.48"
                     /protein_id="AAN24102.1"
                     /translation="MSTATMTSTTTMTLADLKAQEKAAKKAEKERQKRIDADEKAERKR
                     AAKTGFSNPANPTRSMALTIVCAIFAVYCLFPFVYLMINATKTQSDFTSTFGLGFGKTF
                     ALFDNIATVFTYQDGIFGRWFVNTILYVVVGAGGATLLAIMGGYALAKFRFPGRKLCFV
                     IIIGAISVPGIALAVPQFLLFAKMGLTNTPWSMIIPSLVSTFGLYLMWIFSDQAVPDEL
                     LEAARVDGAGEFRTFFQISLPLLAPGIVTTALFAIVATWNNYFLPLIMLKDSNWYPLTI
                     GLNQWKDQASTAGGQAIQNLVITGSLITIIPLVIAFLCLQKYWQSGLAAGAVKE"
     gene            complement(3330..4292)
                     /locus_tag="BL0261"
     CDS             complement(3330..4292)
                     /locus_tag="BL0261"
                     /note="COG family: ABC-type sugar transport systems,
                     permease components; PFAM_ID: BPD_transp"
                     /codon_start=1
                     /transl_table=11
                     /product="gnl|TC-DB|D6ZW63|3.A.1.1.48"
                     /protein_id="AAN24103.1"
                     /translation="MSDQTMAAAPQPTVGILPEEADLHTAEARVNKHKADWRGWKFMWP
                     FAVVFVFVFIIPIVYAIYISFFKKQMVGGTKFVGFENYARLIQDPQFWSSVGRVTIFTV
                     FQVPIMLFLAAAMALALDSMKLHGTKFFRISTFLPYAVPAVVSTMIWGFVYGAKYGLVG
                     SLNDFLGTNIDVLNPDVLLASIANINTWEYAGYNMLIFYSSLSTIPHSLYEAASIDGAS
                     EWQIVKKIKLPELKGSLAITVIFSIIGSFQLFNEPSILQNMVPGNAITTYYTPNMYAYN
                     LSFTGNQSNYAAALAIVMAIITMAIAYVVQLKSMKEQMK"
ORIGIN
        1 ctagcaggac gctttagcaa taagaatggc attgcggttc agcgtatagc cggtggtgtc
       61 ggcctcgcaa cggtaggcga tgattggttc tccctcaatg ccgttgacgg caacgggctg
      121 gtttgagcgg ttgaggtaga aatcgaagcg ggtggagccg tctgcggatc ggcggatggt
      181 gtgcaggatg cggggatctg tggtgggata ggttggagtt tgaccactct cagtcggctg
      241 cgccgacaac tcctgccatc gggagccaag tgctttgagc aactgggcaa tgtcgtgacg
      301 gttgaggtcg cagcccacgt agatggcggt accgttgcca taggggcggc tggtgatggc
      361 gggggtgcgc tccagctccc agtcggcggc ggactcacct gcgtaagagg caagcactgt
      421 ggtgtccgcg gctacggaag tcacgtcgtt ctgccacagg cgggtcgtca gaccattgga
      481 caggctgatt tcgctgggct cgccttcggc ttcttcaccg aggatgttga attcttcgga
      541 gcggatgccg agcatgtcgc gtaggagccc gttgccggcg ccggggtagc cgccgaggcc
      601 gatgtggaag tgctcgtcga tcaggccggc ggcatagccg acgatgacgg ttccgccggc
      661 cttcgcgaag tcggcgatac ggagaacgtc ttcgtcggac aggctgagca cggtgggcag
      721 cacgatggtt ttgtagccgg tccagtcgta ggcgagcggc accacgtccg cgcgcagccc
      781 ggcatccagg aagccgcggt accagtcgcg cacgtcgtgc cagtggttga gtttcatgct
      841 gggcagggtt tcggagcgtg tggcccattc ggattccgcg ctgaacagga tcgccgtgcc
      901 ggcacgctcg agctcagtgc cctgcagccc ggcgtcggag agggtcttca gcgccttacc
      961 gagctcgcat acgccgcgga agaccttgga atcggcaccc gcgtggggca gcatggcgga
     1021 gtggaacgcc tcggcgcccg acttggattg ccgccattgg aaaaagcaga tggcgtcggc
     1081 gcccatggcc acgtgggcca gggagtcgcg catgagttcg ccggcccgtt tgcgtgtgtt
     1141 cagcggcttc cactgcacgg ctgaggtgga gtgctccatc acgtaccacg gcttgcccag
     1201 cgcgagggag tccatgagcg cgtccgagca ggcgagttcg tccaggtggg attcgccctc
     1261 atggaagtag tgatcgttgg acacgaagtc cacctcatcc gcccatttgg cgtagttcat
     1321 gacgcactgg tcggtggaga ccatgaagtt cgtggtgaac ggcttgtcgg ggcagatctg
     1381 ctcgatggcg tcgcgttcgg ctttgtagaa gtcgagcagc atgtcgttgc cgaaccgctc
     1441 gtaatccaac tgctgcgacg ggttgaccat ggcgtcgccg cccatgtgac gtggcagcag
     1501 cacctcgtcg aaactgttca cgtgctgcga ccagaaggcc gtgccccacg cctcgttcaa
     1561 cgcgtcgatg gtaccgtact tggcctcgca ccacgtgcgg aacgcggcca aggcgttgtc
     1621 ggagtagtcg tagcggttgt tccagccgta ttcgttgccc atgtgccagg cggtcacata
     1681 cgggttgtcc ttgtagtgtt cggcaagtct gcggcacagg cgcagcgcgt attccttgaa
     1741 caccgggctt gttggctgcc acgactggcg tgagcccgcg ttgacggtat gaccataccg
     1801 gtctaccggc agcacctctg gatgggattc gtacagccac agcggcgcgg cggctgtggc
     1861 ggaggccaag tccacggcga tgccggctct gccgagcctg tcgatcacat ggtcgagcca
     1921 ctcgaacgtg aacgcgccct cgaccggctc gatcttgtcc cagctgaaaa ttgccagcga
     1981 tacgacgttc acgccggcct cacccatgag acggatatcc tcgtccagcg tctcctcggg
     2041 ccactggtcc gggttgtagt cgccgccgaa cgcgatgccg cggccggatt ccgtcagcag
     2101 ggacggccac ctaaatgctc tatgagtagt catattaatc aaatccttta ttgtatcggt
     2161 ttgcgggaag tgctgtgctt gcaggttgtg aacaccagag aggccgcccc cgctggcggg
     2221 gctgtcagcg aagctgactg ggggtggtcg ccagtcgaat ccccatatga ccaccctcag
     2281 tccgctccgc ggccagctcc cgtcagaggg agccagaggt tactccttga cggcgcctgc
     2341 ggcgaggcct gactgccagt acttctgcag gcacaggaac gcaatcacca gagggatgat
     2401 cgtgatcagc gaaccggtaa tcacgaggtt ttggatagct tgaccgcctg cggttgaagc
     2461 ctggtccttc cactggttca gaccgatcgt caacgggtac cagttggaat ccttcaacat
     2521 gatcaacggc aggaagtagt tgttccacgt cgctacaatg gcgaacaatg cagtggtcac
     2581 gatgccgggt gccaacagcg gcagggaaat ctggaagaag gtgcggaact cgccggcacc
     2641 atccacgcgc gcggcttcaa gcagctcatc cggcacggcc tgatcggaga agatccacat
     2701 cagatacaga ccgaacgtgg ataccaaact cgggataatc atcgaccacg gggtgttcgt
     2761 gaggcccatc ttggcgaaca gcaggaactg cggcacggcc agcgcgatac ccggcaccga
     2821 aatggcgccg atgatgatca cgaagcacag cttacggccg gggaagcgga acttggccag
     2881 cgcatagccg cccatgatgg ccagcaaggt ggcaccgccg gcgccgacca ccacatacag
     2941 aatcgtgttg acgaaccagc ggccgaagat accgtcctga taggtgaaca ccgtggcgat
     3001 gttgtcgaac agggcgaacg ttttgccgaa accgaggccg aacgtcgaag tgaagtcgga
     3061 ctgggtcttg gtggcgttaa tcatcaggta gacaaacggg aagaggcagt agaccgcgaa
     3121 aatcgcgcac acgatggtca gggccatcga gcgggtcggg ttcgccgggt tggagaaacc
     3181 ggttttggcg gcgcgcttgc gctcggcctt ctcgtcggcg tcgatgcgct tctgacgctc
     3241 cttctcggcc ttcttggcgg ccttttcctg agccttgaga tcggccaggg tcatggttgt
     3301 tgttgaagtc atggttgcag tgctcataat tacttcatct gctccttcat actcttaagc
     3361 tggacgacat acgcaatggc catggtgatg atggccatca cgatggccag agctgcggca
     3421 tagttgctct gattgccggt gaagctcagg ttgtaggcgt acatgttcgg cgtgtagtac
     3481 gtggtgatcg cgttgcccgg aaccatgttc tgcaaaatgc tcggctcgtt gaacagctgg
     3541 aagctgccga tgatcgagaa gatcaccgtg atggccagcg agcccttcag ctccggcagc
     3601 ttgatcttct taacaatctg ccactccgaa gcgccgtcga tggaggcggc ctcatacaag
     3661 ctgtgtggaa tggtgcttag ggagctgtaa aaaatcagca tgttgtagcc ggcatattcc
     3721 cacgtgttga tgttcgcgat ggatgcaagc agcacgtcgg ggttgagcac atcgatgttg
     3781 gtgccgagga agtcgttgag ggagccgacc agaccgtatt tggcgccata cacgaaaccc
     3841 caaatcatgg tggagaccac tgcgggcacc gcatagggca ggaatgtgga gatgcggaag
     3901 aacttggtgc catgcagctt catcgaatcc aaagcgaggg ccatggctgc ggccagaaac
     3961 agcatgatcg gcacctggaa tacggtgaag atagtgacgc ggcccaccga gctccagaac
     4021 tgcggatcct gaatcagtcg ggcgtagttc tcgaagccga cgaacttggt gccgccgacc
     4081 atctgcttct tgaagaagga gatgtaaatg gcgtacacaa ttgggatgat gaacacgaag
     4141 acgaacacca cggcgaacgg ccacatgaac ttccagccgc gccagtcggc cttgtgcttg
     4201 ttgacgcggg cctcggccgt gtgcagatcc gcctcctcag gcaggattcc caccgttggc
     4261 tgcggggctg cggccattgt ttgatcggac at
//
