LOCUS       AE015928                6485 bp    DNA     linear   BCT 31-JAN-2014
DEFINITION  Bacteroides thetaiotaomicron VPI-5482, complete genome.
ACCESSION   AE015928
VERSION     AE015928.1
DBLINK      BioProject: PRJNA399
            BioSample: SAMN02604314
KEYWORDS    .
SOURCE      Bacteroides thetaiotaomicron VPI-5482
  ORGANISM  Bacteroides thetaiotaomicron VPI-5482
            Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
            Bacteroides.
REFERENCE   1  (bases 1 to 6485)
  AUTHORS   Xu,J., Bjursell,M.K., Himrod,J., Deng,S., Carmichael,L.K.,
            Chiang,H.C., Hooper,L.V. and Gordon,J.I.
  TITLE     A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis
  JOURNAL   Science 299 (5615), 2074-2076 (2003)
   PUBMED   12663928
REFERENCE   2  (bases 1 to 6485)
  AUTHORS   Mahowald,M.A., Rey,F.E., Seedorf,H., Turnbaugh,P.J., Fulton,R.S.,
            Wollam,A., Shah,N., Wang,C., Magrini,V., Wilson,R.K., Cantarel,B.L.,
            Coutinho,P.M., Henrissat,B., Crock,L.W., Russell,A.,
            Verberkmoes,N.C., Hettich,R.L. and Gordon,J.I.
  TITLE     Characterizing a model human gut microbiota composed of members of
            its two dominant bacterial phyla
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 106 (14), 5859-5864 (2009)
   PUBMED   19321416
REFERENCE   3  (bases 1 to 6485)
  AUTHORS   Xu,J., Bjursell,M.K., Himrod,J., Deng,S., Carmichael,L.K.,
            Chiang,H.C., Hooper,L.V. and Gordon,J.I.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2002) Department of Molecular Biology and
            Pharmacology, Washington University in St. Louis, 660 S. Euclid, St.
            Louis, MO 63110, USA
REFERENCE   4  (bases 1 to 6485)
  AUTHORS   Mahowald,M.A. and Gordon,J.I.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2009) Center for Genome Science, Washington
            University in St. Louis, 4444 Forest Park Ave., St. Louis, MO 63108,
            USA
  REMARK    Protein update by submitter
COMMENT     On or before Jan 5, 2006 this sequence version replaced AE016926.1,
            AE016927.1, AE016928.1, AE016929.1, AE016930.1, AE016931.1,
            AE016932.1, AE016933.1, AE016934.1, AE016935.1, AE016936.1,
            AE016937.1, AE016938.1, AE016939.1, AE016940.1, AE016941.1,
            AE016942.1, AE016943.1, AE016944.1, AE016945.1, AE016946.1.
FEATURES             Location/Qualifiers
     source          1..6485
                     /organism="Bacteroides thetaiotaomicron VPI-5482"
                     /mol_type="genomic DNA"
                     /strain="VPI-5482"
                     /type_material="type strain of Bacteroides
                     thetaiotaomicron"
                     /db_xref="taxon:226186"
     gene            complement(1..1323)
                     /locus_tag="BT_0865"
                     /old_locus_tag="BT0865"
     CDS             complement(1..1323)
                     /locus_tag="BT_0865"
                     /old_locus_tag="BT0865"
                     /note="chitobiase-like"
                     /codon_start=1
                     /transl_table=11
                     /product="CBM32"
                     /protein_id="AAO75972.1"
                     /translation="MRKISYILISGCITLSIIGCDETFDTSNTSEGILSLSENGLTILQ
                     SYNVGEKYNADLWIQHGGLELNNSTVTFTVDKSLLDSLNTADGTSYQILPEDCYQMTNT
                     TVNVSAGDRLAKGTIVYDPTKIHALCGYDNVQYILPLKASTTGEKLNPGRSTLLLGFKV
                     SEPIVTIINDGIQEINVNNVKELPITIGVPFSNKWNINCTLVNNQSVVDTYNSANQTYF
                     SLLPAECYTKPESPSLSQGVDQTTVSYKLKDNILPGNYMLPVQIGEVTSDATIRADKDT
                     YTGFCIIKEGTKISKSGWEVLSFTTQEASGEGAGNGLAKCLIDGDTETFWHAKWQGGSD
                     PLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAASEDNVNWTPIGRFGFTNQDA
                     ALEYYVKSIKARYIRLTIPDDGGNSTVAAIRELDVKGTIIN"
     gene            complement(1354..3252)
                     /locus_tag="BT_0866"
                     /old_locus_tag="BT0866"
     CDS             complement(1354..3252)
                     /locus_tag="BT_0866"
                     /old_locus_tag="BT0866"
                     /codon_start=1
                     /transl_table=11
                     /product="SusD homolog"
                     /protein_id="AAO75973.1"
                     /translation="MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVA
                     YTKRWYANVFAGIPDYSGINSLNVGAFKNPWAAICDELVVGYGNAAKANNSDKNAATAG
                     FHRYGDCYKYIRQANIFLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYLLLE
                     QYGPIILVKDKVYEATETQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWP
                     TKGVALAVRAKLWLYAASPLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFI
                     DYAETGNRYELYKEYTTSSTGEQILDVDASVYNLFQKYNKEIIWGTANNDWGGLDGDAF
                     DRRIVPRCEKNGLGSTGVTQELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKND
                     GKYSKNYTNVTVSNRYLNREARFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTT
                     GYMLFKRFNRSISKTSPGVASQNRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLV
                     RERAGLPKVEILNPGIVGNKELQRAAIQRERQIELATEGQRYFDVRRWMIADKDGEGRQ
                     NGYAHGMNVRGTINDTEEFNRVVETEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW"
     gene            complement(3273..6485)
                     /locus_tag="BT_0867"
                     /old_locus_tag="BT0867"
     CDS             complement(3273..6485)
                     /locus_tag="BT_0867"
                     /old_locus_tag="BT0867"
                     /codon_start=1
                     /transl_table=11
                     /product="gnl|TC-DB|Q45780|1.B.14.6.1"
                     /protein_id="AAO75974.1"
                     /translation="MKNILFTSNKVHTTARIGVLFFSLCFSPLINAGNAEKPMNGIESS
                     ETTQQNKIKITGVVTDSKGESIIGANVVVKGQSNVGAITDVEGRYQIMIPSDNAILQVS
                     YLGYVTEEIKVKGRRNINVMLNEDSKALDEVVVVGYGQQKKESVVVSMSSIKPKDIVVP
                     SRSLNNSLAGQVAGLIAVQRSGEPGYDNAEFWIRGVSTFAGGTSPLVLVDGVPRSMSDI
                     EPDEIETFSVLKDAAATAIYGAEGANGVVLVTTKRGRVEKAKISFKTEHTISSPTRLPE
                     FVGSADYLDLFNEALHNDGELPQFSDDLIAHYRNNDDPDLYPNTNWIDKMLRKNTFTHR
                     YTLNVRGGTEKAKYFVSAAYYNESGIFKGSPTKQYNTNIGIDRINLRSNIDMNVSSTTT
                     VGVDLALQYLVNNYPGTGTANIFRSMLITPPYTFPAVYSDGTVSTYSQERDANMRNPYN
                     LLMNSGYAKEYRTAIQSKVYVDQKLDFITKGLSVRLNASYDYDSEMIVRREYNPTRYHA
                     TGHDENGNLLFATVVSGNPELQDPKNSATSATKKIYIDAAINYKRTFDQHEVGAMLLYM
                     QKETQYHNVALPYRKQGLVGRLTYGYGGRYFIEGNFGYTGSEAFASGNRFGFFPAVGLA
                     YYISNESFYPEVIKKYVPKLKLRASVGRAGNDNTGGTRFLYRPTYKMDAGGFTQGYNDT
                     GGGLNGIGNGIIEGRFAAPYLGWEVEDKQNYGFDIGLFDNRLEVIFDYFDSTRSQILLQ
                     RQTVPQLGGLRDDPWQNFGKVRNRGVDMSVNAHQNIGKVKLSARGTFTFTRNKILEYDE
                     LPPKYDYQAITGKRVSDKDNLYYIAERLYTEDDFTVSTNANGLKTYKLRSEIPQPTLGG
                     LLGPGDIKYTDVNGDGIIDSYDRVRGIGHPETPEIIYGFGLNAEYKGIYASIFFQGAGN
                     TSVLLGGKTSEGWYPFSWGVDQSNYRTFALNRWTENNPSQDVIIPRLHKSNANNANNRV
                     ASTWWLRDGSFLRLKNIEIGYQIPKKFLSKIGFEAARIYLMGYNLAVWDHIKYFDPEAG
                     NANAGLNYPLPRTYTIGLDFTF"
ORIGIN
        1 tcagttaata atagtgccct tgacatccag ttctctgata gcagcgacag tactgtttcc
       61 tccgtcatcg ggaatcgtga gtctgatgta acgtgctttg atcgatttta cataatattc
      121 cagggcggca tcctgattcg tgaatccgaa tctgccgata ggagtccagt tcacgttatc
      181 ttcactagct gcaaactcga ccactttgat aggattgttt gaacctctgc cgcgcggaag
      241 caattccacc tgtgctattt gtatgttttg cttcatatct atcacaatat catacggtag
      301 cgggtcgctt ccaccttgcc atttggcatg ccagaatgtt tcagtgtctc cgtctatcag
      361 acatttggct aatccattgc cggctccttc tcccgaagct tcctgtgtcg taaaggacag
      421 aacttcccag ccgctctttg atattttcgt tccttctttt atgatgcaga atcctgtgta
      481 ggtgtcttta tccgcacgga tagtggcatc ggaagtaact tcgcctattt gcacaggaag
      541 catataattt cccggaagaa tgttatcttt cagcttgtaa ctgactgtgg tctgatcaac
      601 tccctgagac aatgacgggg attcgggttt ggtatagcac tctgccggca gaagactgaa
      661 ataagtctga ttggcactgt tgtacgtatc tactaccgac tggttgttga ctaatgtaca
      721 gttgatgttc catttattgc taaaaggtac tccaatggta atcggcaact cttttacatt
      781 gttgacattg atttcctgta taccatcgtt tatgatagtt acaatgggtt cggaaacttt
      841 aaatcccagt aggagggtgg aacggccggg gttcaacttc tctcctgtag tgcttgcttt
      901 gagtgggaga atgtattgaa cattgtcata gccgcacaac gcatgaatct ttgtcgggtc
      961 gtatacgata gtgccttttg ccagtctgtc accggcagat acgttaaccg ttgtgttagt
     1021 catttgataa caatcttccg gaagtatctg gtaactggtt ccgtcggcag tattgagtga
     1081 gtcgagcagg cttttgtcta cggtgaaggt gacggtactg ttattcagtt ccagtcctcc
     1141 gtgttgtatc cataagtcag cattgtattt ttctcctaca ttatacgatt gcagaatagt
     1201 cagtccgttt tcagacaatg acaaaatccc ttcggatgta ttgctcgtat caaaggtttc
     1261 atcacaaccg ataatagata gagtgatgca gcctgatatt agtatataac ttatttttct
     1321 cataatgctc attgatttat tgtgcttata caattaccag cccggattct ggacgaggtt
     1381 ttgtgtcttt ctcatttcgt gatccggtat tggctgtaag tacatctttc tgttgaatac
     1441 aattttttca gtttccacta cgcggttgaa ctcttcggta tcattgatag ttccccgaac
     1501 attcataccg tgtgcatatc cgttctggcg tccttcaccg tctttgtcgg caatcatcca
     1561 gcggcgtaca tcaaaataac gttgaccttc cgttgccagt tcaatctgac gttcgcgctg
     1621 aatggctgct ctttgcaatt ctttattacc tacgataccg ggattcagta tttctacttt
     1681 cggcaagcct gcccgttcgc gtacgaggtt cagataagtc agtacgcgtg agtcgctcgg
     1741 atttacttcg ttggcaactt ctgcatatat cagatagaaa tccgccagac ggaagattat
     1801 ggaaggacgg ttctgactag ctacacccgg actggttttg ctgattgatc ggttgaagcg
     1861 cttgaaaagc atatatccgg ttgtagtggc ttgtccttcc tgaacgcctg cattacctcc
     1921 attgtagaac tggacttgtt tgcaggtgac aggccattgg cgtccgttga agaagacagt
     1981 gttgtagaaa cgtgcttcac gattcagata gcggttactg actgttacgt tggtgtagtt
     2041 cttagagtat tttccgtcat tcttgtcctt gtaagttccg taaccatctt ctttataaag
     2101 tgttgatttc ggcagatagt cggtttcctt gataggaagt ccgtcgttca tatagaaggc
     2161 gtctacgagt tcttgcgtta ctccggtcga acccaaaccg ttcttttcgc agcgaggaac
     2221 gattcttcgg tcgaatgcgt caccgtcaag tcctccccag tcgttgttgg cggtgcccca
     2281 gatgatttct ttattgtatt tctgaaagag gttgtaaacg gaggcatcta cgtctagaat
     2341 ctgttcaccg gtgctgcttg ttgtatattc tttgtataac tcgtagcggt ttccggtttc
     2401 tgcgtaatcg atgaaatctt tgcaggcgtt taatgcagta ttccatttgt tgtcatcacg
     2461 atccgggaag agtcttgtac cgtctgggtt ggtcagagac agcgcttctc tgtatccccc
     2521 gttgagaagg gggctggctg catatagcca caatttggca cgtacggcca aagcgacacc
     2581 tttggttggc catgcgcggt aagattcatt ttcgtgcatc ggttcctgtg gcagttcatt
     2641 agctacttca cgtagttcct gatcaatata cgtgataact tcatctaccg tatttctggg
     2701 aacatcctga gtctctgtcg cctcgtatac cttatctttt acgaggataa taggaccgta
     2761 ttgttccaat agcagataat tgtaaaatgc acgcatgaag cgtacgttgg cacgcatctc
     2821 attcagttcg tcttcttcca gtctgtcgcc ttgcgtaccg ctggttgtaa tcacatgagc
     2881 tttctctagg aaaatgttag cctgccggat gtatttatag cagtcgccat agcggtgaaa
     2941 accagcagtc gccgcattct tgtccgagtt gttggccttg gcagcatttc cataacctac
     3001 tactagttca tcgcagattg cagcccacgg atttttaaag gctcctacat tcaggctgtt
     3061 tattcccgaa taatcgggga ttcctgcaaa gacattggca taccatcgtt tggtataggc
     3121 tacgttttca aatatttgat ctgtattttg caagcctcct gacatctggt ccgaaacagc
     3181 cagataatca catgaactga cggagaagaa taatcccatc agcaacatat atatgtgact
     3241 tttacttttc atatttttat cttttatggt ttttagaatg tgaaatcaag accgattgta
     3301 taggttcgcg gcagcggata gttaagtccg gcattcgcat ttccggcttc cggatcgaaa
     3361 tatttgatat gatcccatac tgccaggtta tatcccatca gatagatacg ggcagcttcg
     3421 aagccgatct tgcttaagaa tttcttaggt atctgatagc cgatttctat attcttcaat
     3481 cggaggaaag agccatcgcg cagccaccat gtactggcaa cgcggttatt agcattgttc
     3541 gcattgctct tgtgcagacg gggaataatt acatcctggc tcggattgtt ctctgtccaa
     3601 cggtttaatg caaaggtgcg atagttggac tggtctacac cccatgagaa tgggtaccat
     3661 ccttcggaag tctttccacc caataataca gaagtgttcc ctgctccctg gaagaagatg
     3721 ctggcgtaga ttcctttata ttcggcattt aaaccgaatc cgtagataat ttccggagtt
     3781 tccggatgac cgattcctct tacacggtca taagagtcga tgattccgtc tccattgacg
     3841 tcggtatatt tgatgtcacc gggaccaagg agtccgccta aggttggttg tggaatttcc
     3901 gaacggagtt tataagtctt cagaccgtta gcgttggtgc ttacggtaaa gtcgtcttcg
     3961 gtataaagtc gttctgcgat gtaatagaga ttatctttat cactgacacg tttgcccgta
     4021 atagcttggt agtcatactt tggaggaagt tcatcatatt ccagaatttt attgcgggtg
     4081 aatgtgaatg tacctcttgc gctaagtttt accttgccta tattttgatg agcgttcaca
     4141 gacatgtcaa cacctctgtt gcgaacctta ccgaagtttt gccacggatc gtctctcaga
     4201 ccgccaagct ggggaacagt ctgacgttgc agcagaatct ggcttctggt agaatcgaag
     4261 taatcaaaga taacttcaag acggttgtca aacaagccga tatcgaaacc gtagttttgt
     4321 ttgtcttcta cttcccatcc caagtaagga gctgcaaaac gtccttctat gatgccgttg
     4381 ccgataccgt tcagaccgcc tccggtatca ttgtaacctt gcgtaaaacc tccggcatcc
     4441 attttgtagg tcggacggta caagaaacgg gttcctcctg tattgtcgtt accggcacgt
     4501 ccgacagagg ctcttaattt gagtttgggg acatactttt tgattacttc cgggtagaaa
     4561 gactcattgg aaatgtagta ggcaagacct actgccggga agaaaccgaa acggttgccc
     4621 gaagcaaatg cttccgaacc ggtgtatccg aagttgcctt caatgaaata gcgtccgccg
     4681 taaccgtaag ttaaacgtcc taccagacct tgcttacgat agggaagtgc tacattgtga
     4741 tattgggttt ccttttgcat gtacaatagc atggcaccta cttcgtgctg gtcgaacgta
     4801 cgtttatagt tgatggcagc atctatgtaa atcttcttgg ttgcgcttgt cgcactattc
     4861 ttagggtcct gcaattcagg gtttccggat acgactgtgg caaataatag attgccgttt
     4921 tcgtcgtgtc ccgtagcatg atatcttgtc ggattatatt cacggcgaac gatcatttca
     4981 ctatcatagt cataacttgc gttcaggcgt acagacaaac ctttggtgat aaaatccagt
     5041 ttctggtcta cataaacttt ggattgaatg gcagtacggt attctttggc gtatccggag
     5101 ttcatcaata agttgtacgg gttgcgcatg ttagcgtcac gttcctgtga gtaggttgaa
     5161 acagtaccat cactgtatac agccggaaat gtataaggag gagtaatcag catggaacgg
     5221 aatatattgg cagttcctgt tcccggataa ttattaacca gatactgaag tgcgaggtca
     5281 actcctacag ttgtagtgct tgatacgttc atatcaatat ttgaacgaag attgatacgg
     5341 tcgatgccga tgtttgtatt atattgtttg gtaggacttc ctttgaaaat accactttcg
     5401 ttgtaatatg ctgccgaaac aaagtatttt gctttttctg tacctccacg tacattcaag
     5461 gtatatctgt gtgtgaatgt gtttttacgt aacattttgt cgatccagtt ggtatttgga
     5521 tataggtccg gatcgtcatt gttccggtaa tgtgcaatta agtcatccga aaactgcggt
     5581 aattccccat cattatggag tgcttcgttg aacaggtcca gatagtcggc cgaaccaacg
     5641 aattcgggaa gacgggtggg ggaagaaatg gtgtgttctg tcttgaatga aatctttgcc
     5701 ttctctacac gtccgcgttt ggtagtgaca agtactacac cattggctcc ctcggcacca
     5761 taaatggctg ttgcagcggc atccttcaaa accgaaaacg tttcgatttc gtcgggttca
     5821 atatcactca tgcttctggg tacaccgtcc acaagtacca gtggagatgt accacccgca
     5881 aaggtactta cgcctcgaat ccaaaactct gcgttatcat atccgggttc acccgaacgt
     5941 tgtactgcaa tcaaaccggc gacttgtccg gcaagactgt tattcaggct tcgcgaaggg
     6001 acaacgatat cctttggttt gatggaactc atagaaacga ctacgctttc ctttttctgc
     6061 tgtccgtagc cgactactac aacttcgtcc agcgctttgg agtcttcgtt cagcatcaca
     6121 ttgatgttgc ggcgcccttt tacttttatt tcttcggtta cgtatccaag atatgatact
     6181 tgcaaaattg cattgtcgga aggaatcata atctgataac gtccttctac atcggttatt
     6241 gctccgacgt ttgattgtcc ttttactaca acattggctc cgatgataga ttctcctttg
     6301 ctgtctgtta ctacacctgt tattttaatc ttattttgtt gcgttgtttc tgaactctct
     6361 atgccattca tcggcttttc cgcattgccg gcatttatga gtggagaaaa acataaagaa
     6421 aagaacagaa caccgattcg cgcggttgtg tgcactttgt ttgaagtaaa taaaatgttt
     6481 ttcat
//
