LOCUS       CP001515                6972 bp    DNA     linear   BCT 30-JAN-2014
DEFINITION  Bifidobacterium animalis subsp. lactis Bl-04, complete genome.
ACCESSION   CP001515
VERSION     CP001515.1
DBLINK      BioProject: PRJNA32897
            BioSample: SAMN02603172
KEYWORDS    .
SOURCE      Bifidobacterium animalis subsp. lactis Bl-04
  ORGANISM  Bifidobacterium animalis subsp. lactis Bl-04
            Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
            Bifidobacterium.
REFERENCE   1  (bases 1 to 6972)
  AUTHORS   Barrangou,R., Briczinski,E.P., Traeger,L.L., Loquasto,J.R.,
            Richards,M., Horvath,P., Coute-Monvoisin,A.C., Leyer,G.,
            Rendulic,S., Steele,J.L., Broadbent,J.R., Oberg,T., Dudley,E.G.,
            Schuster,S., Romero,D.A. and Roberts,R.F.
  TITLE     Comparison of the complete genome sequences of Bifidobacterium
            animalis subsp. lactis DSM 10140 and Bl-04
  JOURNAL   J. Bacteriol. 191 (13), 4144-4151 (2009)
   PUBMED   19376856
REFERENCE   2  (bases 1 to 6972)
  AUTHORS   Barrangou,R., Briczinski,E.P., Traeger,L.L., Loquasto,J.R.,
            Richards,M., Horvath,P., Coute-Monvoisin,A.-C., Leyer,G.,
            Rendulic,S., Steele,J.L., Broadbent,J.R., Oberg,T., Dudley,E.G.,
            Schuster,S., Romero,D.A. and Roberts,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2009) Danisco USA Inc, 3329 Agriculture Drive,
            Madison, WI 53716, USA
COMMENT     Genome was manually curated based on annotation generated by the
            NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group.
            Information about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
FEATURES             Location/Qualifiers
     source          1..6972
                     /organism="Bifidobacterium animalis subsp. lactis Bl-04"
                     /mol_type="genomic DNA"
                     /strain="Bl-04; ATCC SD5219"
                     /sub_species="lactis"
                     /culture_collection="ATCC:SD5219"
                     /db_xref="taxon:580050"
     gene            complement(1..1344)
                     /locus_tag="Balac_0483"
     CDS             complement(1..1344)
                     /locus_tag="Balac_0483"
                     /note="COG1653 ABC-type sugar transport system, periplasmic
                     component"
                     /codon_start=1
                     /transl_table=11
                     /product="gnl|TC-DB|P94528|3.A.1.1.34"
                     /protein_id="ACS45862.1"
                     /translation="MKFSTRAIAFLGATAMLIPLAACGGGSSNSGQPSQESNVKEIDVW
                     AWDPSLKQIAADYEKKTGIKVNLKNVGTNTKEYTQLDNAIEAGSGAPDVAQIEYYALPQ
                     YAIKGNLLDITDKTSGYEDFYNPGPWSSVQIDGKVYALPIDAGPMAFFYNKEIFDKAGV
                     DGEKIKTWDDYYEAAKKIHALGDEYYITSDSGDAGFFDSMTWLAGGKPFQTTNNGKDVT
                     INLTGDNGVKEFEKFWQKLLDEKLLDTKTVGWSEDWFKGMQDGTIASLLTGAWMPGNLV
                     NSAPAAAGKWRVALMPTPNGEKANAENGGSSLAVLKSSPKAQAAYDFIEYVAHGDGVKT
                     HVETGAFPADKASLEADYFKNATTIKNSDGKEIDYFGGQKYNEVLAQASADVLTGYQFL
                     PFEVKARGVFGDYLGKSYTGNQPLSEGVAAWQKALIDYGKEQGFTMKE"
     gene            complement(1590..3677)
                     /locus_tag="Balac_0484"
     CDS             complement(1590..3677)
                     /locus_tag="Balac_0484"
                     /note="COG1874 Beta-galactosidase"
                     /codon_start=1
                     /transl_table=11
                     /product="GH42"
                     /protein_id="ACS45863.1"
                     /translation="MSASTQHRAHRWPQPLPGNDRKIWFGADYNPDQWPEDVQDEDIRL
                     MKQAGVNIVSLAIFSWANIETSDGNFEFDWLDRVIDKLYKAGIAVDLASATASPPMWLT
                     SAHPEVLRRDEQGHVIWPGARQHWRPTSPTFRTYALRLCREMAEHYKDNPAIVSWHVGN
                     EYGCHNYFDYSDDAVQAFREWCRDRYGTIDKVNAAWGTNFWSQRLNSFEEILPPRYVGG
                     EGNFTNPGRLLDFKHFCSDALKEFFCAERDVLSEVTPNIPLTTNFMVSASQNTLDYDDW
                     AHEVDFVSNDHYFTPGSWHIDELAYSASLVDGISRKKPWFLMEQSTSAVNWREINPRKE
                     PGELIRDSMLHLAMGADAICYFQWRQSRSGAEKFHSAMLPLAGEHSQIYRDVCALGADL
                     DTLSDAGILRSKLSKARVAIVQDIQSEWATEHTATPTQHIREWTEPLDWFAAFANRGVT
                     ADVTPIHAQWDTYDAVVIPCVYLFSEEMAERLRTFVRNGGKAFVTYYSALADEHDRLHT
                     EGWPGLIGDVVGVRIEEHCPLGTLFPGMLDHLDVSNGTVVHDLADVIDAIADDTTVLAT
                     FEADPATGMDGRAAITVHPYHEGGVAYIAGKLGRDGISQSLPEICAALGFELDADPRAG
                     DVLRVVREQEDGAIFEFLFNRTRNTVTADRPAGDMLICSLATDSTDKVTLEPNGVLAFR
                     R"
     gene            complement(3719..4699)
                     /locus_tag="Balac_0485"
     CDS             complement(3719..4699)
                     /locus_tag="Balac_0485"
                     /note="COG0395 ABC-type sugar transport system, permease
                     component"
                     /codon_start=1
                     /transl_table=11
                     /product="gnl|TC-DB|D6ZW62|3.A.1.1.48"
                     /protein_id="ACS45864.1"
                     /translation="MTTTVSTDIQNTRNARRIERDRQRRIAQDERAERKRSRKNGFTNV
                     ANPRKSTLLTIVCAVFAIYCLFPFLYILINSTKTQADFTSTFGLGFGKTFALWDNIKTV
                     FTYQDGIFGRWFLNTLFYVIVGAGGATLLAIMGGYALAKFRFPGRKAVFAVIIGAISVP
                     GIALAVPQFLLFAKLGLTNTPWAMIIPSLISPFGLYLMWIFSEQAVPTELLEAARVDGA
                     SEARTFFTVALPLLSPGIVTCALFTIVATWNNYFLPLIMLKDANWYPLTIGLNQWKDQA
                     STAGGQAIQNLVITGSMITIIPLVVAFLLLQKYWQSGLAAGAVKE"
     gene            complement(4719..5687)
                     /locus_tag="Balac_0486"
     CDS             complement(4719..5687)
                     /locus_tag="Balac_0486"
                     /note="COG1175 ABC-type sugar transport systems, permease
                     components"
                     /codon_start=1
                     /transl_table=11
                     /product="gnl|TC-DB|D6ZW63|3.A.1.1.48"
                     /protein_id="ACS45865.1"
                     /translation="MTSTTKSPGTAGTPDAAAIAANAVTTGGSARVNKHHADWRGWKFL
                     WPFALVFVFVFIIPILYAIYISFFQTKMIGGTQFVGFDNYIKLFHDPHFWSSVGRVTIF
                     TVVQVPIMLCLAALMALALDSMKLHGTKFFRISTFLPYAVPAVVSTLIWAFMYGAKYGL
                     VGSLNAWFGTHIDVLAPSVLLAAIGNIVTWEFTGYNMLIFYSSLSTIPHSLYEAASIDG
                     ASEWQIVKSIKLPELKGSLAITVIFSIIGSFQLFNEPSIMQNMVPGNTITTYYTPNMYA
                     YNLSFSGNQSNYAAALAIVMAIITMAIAYAVQLRSMKDQMK"
     gene            5974..6972
                     /locus_tag="Balac_0487"
     CDS             5974..6972
                     /locus_tag="Balac_0487"
                     /note="COG1609 Transcriptional regulators"
                     /codon_start=1
                     /transl_table=11
                     /product="DBD-Pfam|LacI,DBD-SUPERFAMILY|0036955"
                     /protein_id="ACS45866.1"
                     /translation="MKDVARLAGVSSQTVSRVANNSSEVKPETRLRVERAMEELGYRPN
                     YAARALKHGSFKDVGVVLFNMTSYGDSHILNGVVDAAREHGYATTIRSFEQGCPATLQS
                     AIDQMKTLPVDGVVFILEQQVADFNTFVPSVELPVVLVSEEPSDHCPTIDSDQYGTSVV
                     LVDYLLAKGHRNVYHIAGPSYSVAAQSRRRGWEDALRQQGIVPPSVYIGDWEADSGYQA
                     GLALAHERDCTAVYAANDQMAYGCILGLREAGKRVPEDVSVVGVDDSLQGIVPRLELTT
                     MREKFNELGREAFGMILAQCNGDKLPVGVKTVIPSVLVERGSVSEVEDRGA"
ORIGIN
        1 ctactccttc atcgtgaagc cttgctcctt gccgtagtcg atgagtgcct tctgccaagc
       61 ggccacacct tccgaaagcg gctggttgcc ggtgtaggat ttgccgaggt aatcaccgaa
      121 gacaccacgg gccttcacct cgaatggcag gaactgatac cccgtaagga cgtccgccga
      181 ggcctgtgcg aggacctcgt tgtacttttg accgccgaag tagtctattt ccttgccgtc
      241 ggagttcttg atggtggtgg cgttcttgaa atagtcggct tcgagggagg ccttgtctgc
      301 ggggaatgcg ccggtttcga cgtgagtttt cacgccatcg ccatgagcga cgtactcgat
      361 gaagtcatag gctgcctgag ccttggggga ggacttgagc acggccagcg acgatcctcc
      421 gttttccgca ttggctttct ccccattcgg tgttggcatc agtgccacgc gccatttgcc
      481 tgcggcagcc ggagccgaat tgacaagatt tccgggcatc catgcgccgg tcagcaggga
      541 tgcgattgtg ccgtcctgca tgcccttgaa ccagtcctcg gaccatccta cggtcttcgt
      601 gtcgaggagc ttctcatcaa gcagcttttg ccagaacttc tcgaattcct tgacgccatt
      661 gtctccggtg aggttgattg tcacatcctt gccgttattg gtggtttgga atggtttgcc
      721 tcctgcaagc caggtcatcg aatcgaagaa gcctgcatcg ccgctgtccg aagtgatgta
      781 gtattcatcg ccgagggcgt gaatcttctt ggccgcctcg tagtagtcat cccatgtctt
      841 gatcttctcg ccgtccacgc cggccttgtc gaagatctcc ttgttgtaga agaaggccat
      901 ggggcctgcg tcgattggca atgcgtacac cttgccgtct atttgcactg acgaccatgg
      961 tcccggatta tagaagtctt cgtatccgct cgtcttatct gtgatgtcaa gcagatttcc
     1021 cttgatcgca tattggggca atgcgtagta ctcgatttgg gcgacatcgg gggcaccgga
     1081 ccccgcttcg atcgcgttgt cgagctgggt gtattccttc gtgttggttc ccacgttttt
     1141 caggttgacc ttgatgcctg tcttcttttc gtagtcggct gcgatttgct tgagcgaggg
     1201 gtcccatgcc cacacgtcga tttccttgac gttgctttcc tgtgatggtt gcccgctgtt
     1261 cgaggagcca cccccacagg ctgccaatgg tatgagcatg gctgttgcgc ccaggaaggc
     1321 gattgcgcgt gtgctgaact tcattgttct tcctttctcc atgttcgcgc gttgctccgt
     1381 tgcatgcatt cgcgaacctt gtcgatgaac actgtagcac cgattttatg tttgcgcaaa
     1441 catatgcgaa aaagcttaaa atcagtacat ttgaagattg atgaatgcaa tgatgtgcaa
     1501 cgtaaacatc tattgtgtcg cacatcattg catcatcgtg atattcggtt gtgggtgttc
     1561 tgcctccgtg tgcgaaggtg tggggctgtt cagcgcctga acgccagaac gccgtttggc
     1621 tcgagggtga ccttgtcggt gctgtccgtt gccaggctgc atatgagcat gtctccagca
     1681 ggacggtctg cggtgacagt gttgcgggtg cggttgaaca ggaattcgaa gatggctcca
     1741 tcctcctgct cccgaaccac gcggagcaca tcgccggccc gcgggtctgc atcgagctcg
     1801 aatccgagcg ccgcacatat ctccggcagg ctctggctga tgccgtccct gcccagcttg
     1861 ccggcaatgt aggccacgcc gccttcgtgg taggggtgca cggtgatggc ggccctaccg
     1921 tccatacccg tggccggatc cgcctcgaag gtggcgagca cggtggtgtc atcggcgatt
     1981 gcgtctatga cgtcggcgag atcatgcacg actgtgccgt tgctgacgtc gaggtggtcg
     2041 agcattcccg ggaagagcgt gccgagtggg caatgttcct cgatgcgaac gccgacgacg
     2101 tcgccgatca acccgggcca gccttccgtg tgcagtcggt cgtgctcatc ggccagtgcg
     2161 ctgtagtacg tgacgaatgc cttgcctcca ttcctgacaa aggtgcgtag acgttcggcc
     2221 atctcctcac tgaacaggta cacgcaggga atcaccacgg cgtcatacgt atcccattgt
     2281 gcgtggatgg gtgtcacgtc cgcggtcacg ccgcgattgg cgaaggcggc gaaccagtcg
     2341 aggggctccg tccattcgcg tatgtgttgg gtgggtgtgg ccgtatgctc ggtggcccat
     2401 tcggactgga tgtcttgcac aatggccacc cgtgcctttg aaagcttcga gcgcagtatg
     2461 ccggcatcgc tcaatgtgtc gaggtctgcg cccaatgcgc atacatcccg gtagatctgc
     2521 gaatgctccc ctgccagtgg cagcatggcc gagtggaact tttcggcacc ggaccgcgac
     2581 tggcgccact ggaagtagca gattgcgtcc gcgcccattg ccagatgcag catcgagtcg
     2641 cggatgagct cacctggctc cttgcggggg ttgatctcgc gccaattgac tgcggaggtg
     2701 gattgctcca tgaggaacca gggcttcttc cttgagatgc cgtccaccag ggaggcggag
     2761 tatgccagtt cgtcgatatg ccagctgccg ggggtgaaat agtgatcatt ggacacgaag
     2821 tccacctcgt gggcccagtc atcgtagtcg agcgtgttct gcgacgcgct caccatgaaa
     2881 ttggtggtga gcggaatatt cggcgtcact tcggacagca cgtcgcgttc ggcgcagaag
     2941 aactccttga gcgcgtccga gcagaagtgc ttgaaatcga gcaggcgccc cgggttggtg
     3001 aagttgcctt cgccgcccac ataacgcggc ggcaggatct cctcgaagga gttgagtcgt
     3061 tgggaccaga agttcgttcc ccacgcggcg ttcaccttgt cgattgtgcc gtaccggtcg
     3121 cggcaccact cccggaaggc ctgcacggcg tcatccgagt agtcgaagta gttatggcag
     3181 ccgtattcgt tgcctacgtg ccatgacaca atggccgggt tgtctttgta atgttcggcc
     3241 atttcgcggc ataggcgcag ggcgtatgtg cggaatgtcg gactggtggg acgccagtgt
     3301 tgacgggctc cgggccatat gacatggcct tgctcgtcgc gccgcagtac ctcgggatgt
     3361 gcgctcgtga gccacatggg cggcgaagcg gtggcggatg cgaggtcaac ggctatgccg
     3421 gccttgtaga gcttgtcgat gacgcgatca agccaatcga attcgaaatt gccgtcactc
     3481 gtctcgatgt tcgcccagct gaagatggcc agggatacga tgttaacgcc agcctgcttc
     3541 atcaggcgaa tgtcttcgtc ctgtacgtct tcgggccatt ggtcggggtt gtagtccgca
     3601 ccgaaccaga ttttccggtc gttgcctggc aggggctgtg gccaacggtg cgcacgatgt
     3661 tgtgtggatg ctgacatgga gtcactcctt cttcattgga tggttgaacg cgaatgtgtc
     3721 attccttgac cgcaccggca gccagacccg actgccaata cttctgcagt agcaggaacg
     3781 ccactacgag cgggatgatg gtgatcatcg atccggtgat cacgaggttc tgaatggcct
     3841 gtccgcctgc ggtggaggcc tggtccttcc actggttcaa gccgatggtc agggggtacc
     3901 agttcgcgtc tttcaacatg atgaggggca ggaagtagtt gttccatgtt gccacgatcg
     3961 tgaacagcgc acaggtgacg atgccggggg agagcaatgg gagtgcgacg gtgaagaagg
     4021 tgcgcgcctc ggaagcgccg tccacccgcg cagcctcaag caactcggtg ggcaccgcct
     4081 gctcggagaa gatccacatc aggtacaggc cgaatgggct gatcagagag gggatgatca
     4141 tggcccaggg ggtgttggtc agaccgagct tggcgaacag caggaactgt ggaacggcaa
     4201 gggcgatgcc cggaaccgag atggccccga tgatcacggc gaagacggcc ttgcggcccg
     4261 ggaagcggaa cttcgccaat gcatatcctc ccatgatcgc cagcaatgtg gcgcccccgg
     4321 cgcccacgat cacgtagaac agcgtgttga ggaaccagcg gccgaagatg ccgtcctgat
     4381 aggtgaacac agtcttgatg ttgtcccaca gcgcaaaggt cttgccgaat cccagaccga
     4441 aggtggatgt gaagtccgcc tgtgtcttcg tcgagttgat gaggatgtac aggaacggga
     4501 agaggcagta gatcgcgaag acagcgcata cgatggtgag cagcgttgac ttgcggggat
     4561 ttgccacgtt ggtgaagccg ttcttgcgac tgcgcttgcg ttccgcacgc tcgtcctggg
     4621 cgattctgcg ctggcgatcg cgttctatcc tgcgcgcatt gcgggtgttt tggatatccg
     4681 tggaaactgt ggtggtcatg tcgatctctc cttgagtctt acttcatctg gtccttcatg
     4741 ctgcgcagct gcacggcgta tgcgatggcc atggtgatga tggccatgac gatcgccagt
     4801 gcggcggcat agttgctttg gtttccggag aagctcagat tgtaggcgta catgttgggc
     4861 gtgtaatacg tggtgatggt gttgccggga accatgttct gcatgatcga cggctcgttg
     4921 aacagctgga aggatccgat gatggagaag atcaccgtga tcgccagcga acccttgagt
     4981 tcagggagct tgatgctttt gacgatctgc cattcgctcg cgccgtcaat ggacgcagct
     5041 tcgtaaaggc tgtggggaat ggtggacagg ctcgagtaga agatgagcat gttgtagccc
     5101 gtgaactccc aggtcacgat attgccgatt gccgccagca ggacgctcgg ggcgagcacg
     5161 tcgatatgcg tgccgaacca agcgttcagc gagccgacca gaccgtactt ggccccgtac
     5221 atgaatgccc agatcaacgt ggacaccacg gccggcaccg catatggaag gaaggtggag
     5281 atgcggaaga actttgtgcc gtgaagcttc atcgagtcga gtgccagggc catgagtgcc
     5341 gccaggcata gcatgatcgg cacctggacg acggtgaaga tggtcacgcg tcccacggac
     5401 gaccagaaat gcgggtcgtg gaagagtttg atgtagttgt cgaatcccac gaactgcgtg
     5461 ccgccgatca tcttcgtctg gaagaaggag atgtagattg cgtacaggat gggaatgatg
     5521 aacacgaata cgaataccag ggcgaatggc catagaaact tccagccccg ccagtccgcg
     5581 tgatgcttgt tcacccgagc cgatcctccg gttgtcacgg cgttcgccgc aatcgccgcg
     5641 gcatctggcg tgcccgctgt cccgggcgat ttcgttgtag aagtcatctt gcctctcctt
     5701 tgaggtcccg taccgttcat ctgtgagcgg tgcgtctgcc ttgcttgcgc ttccgagttc
     5761 gaactactgt gtccgcattc agaatgttta cgcaaacata gtacatcatc gttggaaatc
     5821 aagtcaaatt aagctcacat tgtttatgag cataaaatgc atgattgcgc aaacagttgc
     5881 tatcattgat atattggctt cgacgaagat tccatatttg tcacatgtcg gcgttttgcg
     5941 aaaagtgggt gagatatggc agggtcagtt tcgatgaagg acgtggcgag gctggcgggc
     6001 gtgtcgtcgc aaacggtctc gagggtcgcg aacaacagca gcgaggtgaa gccggagacg
     6061 cgcttgagag tcgagcgtgc gatggaagag cttgggtata ggccgaacta tgcggcgcgc
     6121 gcgttgaagc atgggtcgtt caaggacgtg ggtgtcgtcc tgttcaatat gacgtcatac
     6181 ggtgattcgc acatcctcaa cggcgttgtg gatgcggcga gggagcatgg atatgcgacg
     6241 acgatccggt cgtttgaaca agggtgtccc gcgactttgc agagcgcaat cgaccagatg
     6301 aaaacgctgc cggtagatgg agttgtgttc atcttggagc agcaagtggc ggatttcaat
     6361 acattcgtgc cgagtgtcga gttgccggtg gtgctcgtct cggaagagcc gtcggaccat
     6421 tgcccgacga tcgattcaga tcaatatggg acgtcagtgg tgctggtgga ctatctgttg
     6481 gcgaaggggc atcgcaacgt gtaccacatt gcaggcccgt cgtattcggt ggcggcgcag
     6541 agcaggcgac gtgggtggga agatgccctg aggcagcagg gaatcgttcc gccgtccgtg
     6601 tacataggcg actgggaggc cgacagcggg tatcaggccg gtctggcact ggcgcatgaa
     6661 cgcgactgca cggcggtgta tgcggcgaat gaccagatgg cgtacggctg catcctcggt
     6721 ttgcgcgagg caggcaagcg cgtgccggag gatgtgagtg tcgtgggcgt ggacgattcg
     6781 ctgcagggca ttgttccccg gcttgagctg accacgatgc gagagaagtt caacgagctt
     6841 ggccgtgagg cgttcgggat gatcctcgcc caatgcaacg gcgacaagct gccggtgggg
     6901 gtcaagaccg tcattccatc ggtgcttgtg gaacgcgggt ccgtctccga ggtggaggat
     6961 cggggcgcgt ga
//
