LOCUS       CP001515                6129 bp    DNA     linear   BCT 30-JAN-2014
DEFINITION  Bifidobacterium animalis subsp. lactis Bl-04, complete genome.
ACCESSION   CP001515
VERSION     CP001515.1
DBLINK      BioProject: PRJNA32897
            BioSample: SAMN02603172
KEYWORDS    .
SOURCE      Bifidobacterium animalis subsp. lactis Bl-04
  ORGANISM  Bifidobacterium animalis subsp. lactis Bl-04
            Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
            Bifidobacterium.
REFERENCE   1  (bases 1 to 6129)
  AUTHORS   Barrangou,R., Briczinski,E.P., Traeger,L.L., Loquasto,J.R.,
            Richards,M., Horvath,P., Coute-Monvoisin,A.C., Leyer,G.,
            Rendulic,S., Steele,J.L., Broadbent,J.R., Oberg,T., Dudley,E.G.,
            Schuster,S., Romero,D.A. and Roberts,R.F.
  TITLE     Comparison of the complete genome sequences of Bifidobacterium
            animalis subsp. lactis DSM 10140 and Bl-04
  JOURNAL   J. Bacteriol. 191 (13), 4144-4151 (2009)
   PUBMED   19376856
REFERENCE   2  (bases 1 to 6129)
  AUTHORS   Barrangou,R., Briczinski,E.P., Traeger,L.L., Loquasto,J.R.,
            Richards,M., Horvath,P., Coute-Monvoisin,A.-C., Leyer,G.,
            Rendulic,S., Steele,J.L., Broadbent,J.R., Oberg,T., Dudley,E.G.,
            Schuster,S., Romero,D.A. and Roberts,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2009) Danisco USA Inc, 3329 Agriculture Drive,
            Madison, WI 53716, USA
COMMENT     Genome was manually curated based on annotation generated by the
            NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group.
            Information about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
FEATURES             Location/Qualifiers
     source          1..6129
                     /organism="Bifidobacterium animalis subsp. lactis Bl-04"
                     /mol_type="genomic DNA"
                     /strain="Bl-04; ATCC SD5219"
                     /sub_species="lactis"
                     /culture_collection="ATCC:SD5219"
                     /db_xref="taxon:580050"
     gene            complement(1..1518)
                     /gene="lacS"
                     /locus_tag="Balac_0475"
     CDS             complement(1..1518)
                     /gene="lacS"
                     /locus_tag="Balac_0475"
                     /note="COG2211 Na+/melibiose symporter and related
                     transporters"
                     /codon_start=1
                     /transl_table=11
                     /product="gnl|TC-DB|Q9X761|2.A.2.2.3"
                     /protein_id="ACS45854.1"
                     /translation="MTTNKFQAGAGQTASSAASSDMLRSTTPKTARHGLIRQRAAFAFG
                     NLGQAAFYNAMSTFFMTYVTTALFARTDKAVAARMIALITGLVVAIRIAEIFLDPILGN
                     IVDNTRTKWGRFRVWQFIGGIVPSVLLVVVFTGLFGLVNVNTTWFITLFIVTFILLDVF
                     YSARDISYWGMIPALSSDSHERSVYTSLGTLTGSLGYNGITVVVIPIVSYFTFKFTGEQ
                     GEGQPGWTAFAIIVALLGLITAWTVAFGTRESSSELRKQDSHCGPLDAFKAIAHNDQLL
                     WTALSYLLYAIANVATTGVLFYQFTYVLGMPQRFAIAGVIPVITGLVTTPLYPLLNRVI
                     PRRWLFAGGMGLMILGYALFIAAPRNLSVVLVALILFYLPAQTIQMTAILTMTDSIEYG
                     QLKTGQRNEAVTLSVRPMLDKIAGAFSNGIVGFVAVAAGMVGSASAADMTSANIHTFTT
                     WAYIVPSAGIVLSLIVFLLTVRIDEKRHAQIVRELETQLADSANTER"
     gene            1828..5031
                     /gene="lacZ"
                     /locus_tag="Balac_0476"
     CDS             1828..5031
                     /gene="lacZ"
                     /locus_tag="Balac_0476"
                     /note="COG3250 Beta-galactosidase/beta-glucuronidase"
                     /codon_start=1
                     /transl_table=11
                     /product="GH2"
                     /protein_id="ACS45855.1"
                     /translation="MNEETLQEVAEEKATEPPRNDVPSTDGALRSEEPTAAWLTDPRVF
                     AVNRLPGHTDHNCADDQSGALKQHLDGEWAVKVVPSHLDRLPTEGLDEHWQHAHLPPEF
                     ASRSFADGDFTRVQVPGCLEMQGLMRPQYVNIQYPWDGHENPQAPSVPTDNLVALYRRA
                     FTADDRVGEALSRGERVSLTFHGAATAIYVWLNGVFVGYAEDSYTPSEFDVTEALHAGE
                     NLLAVACFQYSSASWLEDQDCWRFHGLFRDVELEVRPHAHVRDMLAHADWNVDAQCGEL
                     AVELDLDGAWCAANVELRLSTWEEHADGAALLWSATVESAPKIRYATTCEQVLPWSAEQ
                     PNLYVLEAVVRDANGRVLETARTRIGFRHVEIRDGVLVLNGERIVFHGVNRHEFDARRG
                     RSVTEEDMLWDVRFMKRHNINAVRTSHYPNQTRWMELCDEYGLYVIDEANLETHGSWNL
                     PGDTADGVSIPGDDVRWQPACVDRVESMVRRDRNHACVVAWSLGNESYAGDVIRAMGNR
                     CRELDPTRPVHYEGVTWNREYDDISDFESRMYAKPDEIREYLESDPAKPYISCEFMHAM
                     GNSVGGLGEYVALERYPQYQGGFIWDFMDQALWQRLDDGTERLAYGGDFGDRPSDYEFS
                     GDGIVFADRTVSAKAQEVKAQYAGVRLEPDGRGVRVTNTNAFQGTSGTVFVARMLLDGR
                     EAWSKSYEFEVAAGSARSFDIGFPDVHSLPDGGVMHEVVYEVSQQLAHDTAWAEAGYEI
                     AWGQAVVRPHASGRSGSKMNDAFDDDNLQIVTLGRWNAGVRVGQREILLSRTHGGVISL
                     RDGEREYVIRVPKLLTFRPLTDNDRGMSSGFDRVQWFGAGRYARVVTGVGQVYRDELTG
                     DLCGEYWYELADGAQTQVPIRYRIDSQLRMHIELEYTGCAGAPSLPAFGLEWMLPKQYE
                     NLEFYGRGPAETYRDRKRAKLGIWNTTAQADMAPYLVPQETGNHEDVRWAYVFDADCHG
                     LLVEADDSLALSLLPHSSLEIENATHQNELAQPRHMFLRLLAGQMGVGGDDSWGAPVHD
                     RYLLPADEPLKLAVTISML"
     gene            complement(5134..6129)
                     /locus_tag="Balac_0477"
     CDS             complement(5134..6129)
                     /locus_tag="Balac_0477"
                     /note="COG1609 Transcriptional regulators"
                     /codon_start=1
                     /transl_table=11
                     /product="DBD-Pfam|LacI,DBD-SUPERFAMILY|0044558"
                     /protein_id="ACS45856.1"
                     /translation="MVTRKDIAEQAGVSQSTVSRLLNGDPTLKVKADTRRRIMRTAAEL
                     GYRAFTSRSIAVLNVPPQFDELQDAYFQSLQTELRKVAAEQGTTLTFFDSIDSLIAHAD
                     DHDGFVATGPTSFQRTDLAHLRDALRYGVFIDTNPAPDWFDSVRPDLSQTMLDALDTLL
                     VDGYTCIGYIGGVGSIMGLHNHTEDIRSLAFSDWSKRLGLPNEQYIYADGPFTVSNGRA
                     LAARLLTDHPDDLPNALVIGSDPMAVGVLQAFAEAGVRVPTDIAVVSVDNLPIAQYTAP
                     PLSSYAIDLHELVYAALTTLTDAIARDRHVRRHVLLSTELVRRESLPSKS"
ORIGIN
        1 tcaccgttcc gtgttcgcag agtcagcaag ctgcgtctcg agctcgcgaa caatctgcgc
       61 atggcgcttc tcgtcgatgc gcaccgtgag caggaacacg atcaggctga gcacaatgcc
      121 ggcggacggc acaatgtacg cccaagtggt gaacgtatgg atgttcgcac tcgtcatatc
      181 cgcggcggaa gccgatccca ccatgccagc agccactgcg acgaagccga cgatgccgtt
      241 cgagaaggcg cctgcgatct tgtcgagcat cggtcgcacg ctcagcgtca ccgcctcgtt
      301 gcgctgcccg gttttgagct gtccgtattc gatcgaatcg gtcatcgtga gaatcgcggt
      361 catctgaatc gtttgcgcag gcagatagaa cagaatgagc gcgacgagca cgaccgatag
      421 attgcgcggg gccgcaatga acaatgcata cccgagaatc atgagcccca tgcctccggc
      481 gaacaaccat cgacgtggga tcacacggtt gagcaacgga tacagcggcg tggtgaccag
      541 gccggtgatc acgggaatca cgcccgcgat ggcgaaacgc tgcggcatgc cgagcacata
      601 ggtgaactgg tagaacagca cgccggtggt cgccacgttc gcaatggcat acagcaggta
      661 gctcaatgcg gtccacagca gttggtcgtt gtgggcgatg gccttgaacg cgtcaagtgg
      721 gccgcaatgg gagtcctgtt tgcgtagctc gctcgagctc tcacgtgtac cgaatgcgac
      781 ggtccacgcg gtgatgagcc ccagcagtgc gacgatgatg gcaaatgcag tccaccccgg
      841 ttggccttcg ccctgctcgc cggtgaattt gaaggtgaag tagctgacga tgggaatgac
      901 gacgacggtg atgccgttat agccaagcga accggtgagc gtgccgagtg aagtgtagac
      961 gctgcgttca tgcgaatcgc tggagagtgc cggaatcatg ccccaatagg agatgtcgcg
     1021 cgccgagtag aacacgtcga gcagaatgaa cgtgacaatg aacagcgtga tgaaccaggt
     1081 ggtgttcacg ttgacgagtc caaacaggcc ggtgaacacc accacgagca gcacggaggg
     1141 cacaatgcct ccgatgaact gccagacgcg gaaacggccc cacttggtgc gcgtgttgtc
     1201 gacgatattg cccaagatcg ggtcgaggaa gatctccgcg atgcggatgg caacgaccag
     1261 tccggtgatc agggctatca tgcgcgcggc cacggccttg tcggtgcgcg cgaacaacgc
     1321 cgtggtcacg taggtcatga agaacgtgct catggcgttg tagaacgccg cctgaccaag
     1381 attgccgaag gcgaaggccg cgcgctggcg gattaaaccg tgtcgtgcgg tcttcggggt
     1441 ggtcgaacgg agcatgtcgg aggatgcggc agacgacgct gtctgcccgg cacccgcttg
     1501 gaatttgttg gtggtcatgt gacctaacct ccttcattgg cgattacagt tcatatacta
     1561 tacatgattt actaaatttg tttaccgtgt gttggtgtcg atctgtctaa ttatcgattg
     1621 ctgcagtatt tgaaaatcgg ctcaggatat atgtttcatg gatatatgct ctttctgtgt
     1681 gaatgtctgt ctatgaagag attgcgcaat gtgctgaatt cttgttgcgt gatattggta
     1741 aatagtttac tattgcgtag tacaccgaag tacagagccg acggtaccag cgttggtgcc
     1801 gcggtcaaat gcgagtcagg agcaacgatg aacgaggaga ccttgcagga agtcgcagag
     1861 gagaaggcga ccgagccccc gcgcaatgat gtgccgtcca ctgatggagc tctgcgatcc
     1921 gaagagccga cggcggcgtg gctgaccgat ccccgtgtgt tcgcggtcaa ccggctgccg
     1981 gggcataccg accacaattg cgccgacgat cagtccggcg cgttgaagca gcacctcgac
     2041 ggcgaatggg cggtgaaggt ggtgccctcg cacttggatc ggctccccac ggagggcttg
     2101 gatgagcatt ggcagcacgc ccaccttccg ccggaattcg catcgcgcag cttcgccgat
     2161 ggcgacttca cccgtgtgca ggtgccgggg tgtctggaga tgcaggggct catgcgtccg
     2221 caatatgtga acatccaata tccgtgggat ggccatgaaa atccgcaggc accctccgtt
     2281 cccacagaca atctggtcgc actgtaccgg cgtgcgttca ctgccgatga tcgcgtgggc
     2341 gaggcgctgt cccgcgggga gcgcgtgagt ctgaccttcc acggtgcggc gacggcgatc
     2401 tacgtgtggc tcaacggcgt gttcgtgggg tacgcagagg attcctacac ccccagcgag
     2461 ttcgatgtga ccgaggcgct gcatgcgggg gagaatctgc ttgccgtggc gtgcttccaa
     2521 tattcgagtg cgagttggct ggaagaccag gattgctggc gtttccacgg attgttccgc
     2581 gacgtggagc tggaggtgcg acctcacgcc catgttcgcg acatgcttgc gcatgcggat
     2641 tggaatgtgg atgcgcagtg cggtgagctc gccgtcgaac tcgatctcga cggggcgtgg
     2701 tgtgcggcca atgtggagct gcggctcagc acatgggaag agcacgcaga cggcgcggcc
     2761 ctgctgtgga gcgcgacggt ggaatctgct ccgaagatcc gctacgccac gacatgcgaa
     2821 caggtgctgc cgtggagcgc ggagcagccg aatctgtacg ttctcgaggc tgtggtgcgc
     2881 gatgcgaacg gtcgtgtgct ggaaaccgcg cgcacgcgca tcggattccg ccatgtggag
     2941 attcgcgatg gcgtgcttgt gctcaatggc gaacgcattg tgttccatgg cgtcaaccgg
     3001 cacgaattcg acgcgcggcg cggacgcagc gtcaccgagg aggacatgct gtgggatgtg
     3061 cggttcatga agcggcacaa catcaatgcc gtgcgcacct cgcattaccc gaatcagacg
     3121 cggtggatgg agctgtgcga cgaatacgga ctctatgtga tcgacgaggc caatctggag
     3181 acgcatggca gctggaatct gcccggtgac acggccgatg gcgtctcgat accgggggac
     3241 gacgtgcgtt ggcagccggc ttgcgtggac cgtgtggaga gcatggtgcg ccgagaccga
     3301 aaccatgcgt gcgtggtcgc gtggtcgctc ggcaacgaat cgtacgcggg cgatgtgatc
     3361 cgcgcgatgg ggaatcgctg ccgagagctc gaccccaccc ggccggtgca ctacgagggc
     3421 gtgacctgga accgtgaata cgacgacatc agcgatttcg aatcgcgtat gtatgcgaag
     3481 cccgatgaga ttcgcgaata cctggaaagt gatccggcga aaccgtacat ctcctgcgaa
     3541 ttcatgcatg cgatgggcaa ttcggtggga ggactgggtg aatacgtcgc cttggagcgc
     3601 tacccgcaat accaaggcgg cttcatctgg gacttcatgg atcaggcact atggcagcgg
     3661 ctcgacgacg gcacggaacg cctggcctat ggcggcgatt tcggcgacag gccgagtgat
     3721 tacgagttca gcggcgatgg cattgtgttc gccgaccgga ccgtgtcggc gaaggcgcaa
     3781 gaggtgaagg cacaatatgc cggcgtgcgt ctcgaaccgg atgggcgcgg tgtgcgcgtg
     3841 accaatacga atgcgttcca aggcacctcg ggcaccgtgt ttgtggcgcg gatgcttctg
     3901 gacggacgtg aggcatggtc gaagagctat gagttcgagg tggcggccgg aagcgcccga
     3961 agcttcgaca tcggcttccc tgacgtgcac agtctgcccg acggtggcgt catgcatgag
     4021 gtggtgtatg aggtgagtca gcagttggcg catgacaccg cctgggcgga agcggggtat
     4081 gagatcgcat ggggacaggc cgtggtgcgt ccccatgcga gtggccgcag cgggtcgaag
     4141 atgaatgatg cgttcgatga cgacaatctg cagatcgtca ctctcgggcg atggaacgcc
     4201 ggagtgcgtg ttgggcagcg tgagatcctg ctgtcgcgca cgcatggcgg agtcatctcg
     4261 ttgcgcgacg gtgagcgtga atatgtgatt cgtgtgccga aactgctcac gttccgcccg
     4321 ctcaccgaca acgaccgtgg catgagctcc ggtttcgacc gcgtgcagtg gttcggtgcc
     4381 gggcggtatg cgcgcgtcgt caccggcgtg ggccaggtgt accgcgacga gctcaccgga
     4441 gatctgtgcg gcgagtactg gtatgagttg gcagacggcg cgcagacgca ggtgccgatt
     4501 cgttatcgta tcgattcgca gttgcgcatg catatcgaac ttgagtatac ggggtgtgcg
     4561 ggtgcgccga gcctgccggc tttcggattg gagtggatgc tgccgaaaca gtatgagaat
     4621 ctggaattct atggtcgggg gcctgccgag acctaccgtg accgcaagcg cgccaagctc
     4681 ggcatctgga acaccacggc gcaggcggac atggcgccgt atctggtgcc gcaggaaacc
     4741 ggcaatcacg aggatgtgcg ttgggcctat gtgtttgacg ccgattgcca tgggctgctc
     4801 gtggaggccg acgactcgct cgcgctcagc ctgctgccgc acagttcgtt ggagatcgaa
     4861 aatgccacac accagaacga gttggcgcaa ccacgtcata tgttcctgcg cctgctcgca
     4921 gggcagatgg gcgtgggcgg cgacgactcg tggggcgctc ctgttcacga tcggtatctg
     4981 ctgccggcag acgaaccgct caagctggcc gtgacaatca gcatgctctg actcatgcat
     5041 tccgaacatg acgaacccgt gtctgtgtgc acgggttcgt catgcggagg agtctgtgaa
     5101 tatgaccaac cagtgcgcac gcgcacgtat gagtcatgat ttgcttggca gactttcgcg
     5161 gcgaacaagc tcggtgctca gcagaacatg ccggcgcacg tgcctgtcgc gcgcgatggc
     5221 gtcggtgagt gtggtgagcg ccgcatagac gagttcatgc aggtcgatgg cgtaggaact
     5281 cagcggcggt gcggtgtact gcgcgatcgg cagattgtcg acgctcacga cggcgatgtc
     5341 cgtgggcacg cgcacgccgg cctctgcgaa ggcttgcagc acgccgacgg ccatagggtc
     5401 ggagccgatc acgagcgcgt tgggaagatc gtcggggtgg tcggtgagga gacgagcggc
     5461 gagtgcgcgt ccgttgctca cggtgaacgg gccgtcggcg tagatatact gctcgttcgg
     5521 caggcccagg cgcttgctcc agtcgctgaa tgcgagcgag cgaatgtctt cggtgtggtt
     5581 gtgcaggccc atgatcgagc cgacgccacc gatgtagccg atgcacgtgt aaccgtcgac
     5641 gagaagtgta tcgagggcat cgagcatcgt ttggctcagg tcggggcgta ccgaatcgaa
     5701 ccagtccggc gccggattcg tgtcaatgaa cacgccgtag cggagtgcgt cgcgcaggtg
     5761 ggccagatcg gtgcgctgga aagaggtggg tccggtggcg acgaagccgt cgtggtcgtc
     5821 ggcgtgtgcg atgagactgt ctatcgagtc gaagaaagtg agcgtcgtgc cctgctcggc
     5881 tgcgaccttg cgcaactcgg tttgcagcga ctggaaatag gcgtcctgca attcgtcgaa
     5941 ttgtggcggc acgttgagca cggctatcga acggctcgtg aacgcccggt agccaagttc
     6001 cgcagccgtg cgcatgattc tgcggcgtgt gtccgccttc accttgaggg tggggtcacc
     6061 gttgagcaga cgggagacag tgctttgcga gacgccggcc tgctcggcga tgtctttgcg
     6121 agtgaccat
//
