LOCUS       CP001515                6018 bp    DNA     linear   BCT 30-JAN-2014
DEFINITION  Bifidobacterium animalis subsp. lactis Bl-04, complete genome.
ACCESSION   CP001515
VERSION     CP001515.1
DBLINK      BioProject: PRJNA32897
            BioSample: SAMN02603172
KEYWORDS    .
SOURCE      Bifidobacterium animalis subsp. lactis Bl-04
  ORGANISM  Bifidobacterium animalis subsp. lactis Bl-04
            Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
            Bifidobacterium.
REFERENCE   1  (bases 1 to 6018)
  AUTHORS   Barrangou,R., Briczinski,E.P., Traeger,L.L., Loquasto,J.R.,
            Richards,M., Horvath,P., Coute-Monvoisin,A.C., Leyer,G.,
            Rendulic,S., Steele,J.L., Broadbent,J.R., Oberg,T., Dudley,E.G.,
            Schuster,S., Romero,D.A. and Roberts,R.F.
  TITLE     Comparison of the complete genome sequences of Bifidobacterium
            animalis subsp. lactis DSM 10140 and Bl-04
  JOURNAL   J. Bacteriol. 191 (13), 4144-4151 (2009)
   PUBMED   19376856
REFERENCE   2  (bases 1 to 6018)
  AUTHORS   Barrangou,R., Briczinski,E.P., Traeger,L.L., Loquasto,J.R.,
            Richards,M., Horvath,P., Coute-Monvoisin,A.-C., Leyer,G.,
            Rendulic,S., Steele,J.L., Broadbent,J.R., Oberg,T., Dudley,E.G.,
            Schuster,S., Romero,D.A. and Roberts,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2009) Danisco USA Inc, 3329 Agriculture Drive,
            Madison, WI 53716, USA
COMMENT     Genome was manually curated based on annotation generated by the
            NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group.
            Information about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
FEATURES             Location/Qualifiers
     source          1..6018
                     /organism="Bifidobacterium animalis subsp. lactis Bl-04"
                     /mol_type="genomic DNA"
                     /strain="Bl-04; ATCC SD5219"
                     /sub_species="lactis"
                     /culture_collection="ATCC:SD5219"
                     /db_xref="taxon:580050"
     gene            1..1527
                     /locus_tag="Balac_0052"
     CDS             1..1527
                     /locus_tag="Balac_0052"
                     /note="COG5520 O-Glycosyl hydrolase"
                     /codon_start=1
                     /transl_table=11
                     /product="GH30_1"
                     /protein_id="ACS45448.1"
                     /translation="MMKALKTTVHYDVTAGRTHTEQTELSVMDEAMNTEHIVESNVVGI
                     YPDYTFQMMEGYGCSLTESACYLLSKMDSATRKEALAQWFGPAGMDAWFVRVHIDSCDY
                     SLSEYQAVEDPLADPELETFSIDRDRQYILPVLKEAMAMAGHPIHVLLSPWSPPAQWKT
                     PPEMTRNDASVYGGEEGDVIDLSKPGRCFGGRLKPEYYSSWARYLVRFISAYMAEGVPV
                     TMLSIQNEAAAATSWDSCLWTGDQEREFLKHHLYPAMEEAGLTDAVKIFIWDHNKERAI
                     EHIDEFMSDPEAAKEVGGFAYHWYSGDHFEALSMLRGKYPDKVLMHSESCGLHIPGKVT
                     MLDMTDEQIEALPDGDYKTMVQTTTPNEMDFNDATAYAHDIIGDLNHGMQRWIDWNMIV
                     DRQGGPRHTPGGFAAPIVAEDDGRYTLTISYRYIREIAQAIKPNAVVLGTSTYSRDIEA
                     VSARNADGSIGVVLLNQAERDIPVNIRMGGLLVADVPLPARTLSTLVFTE"
     gene            complement(1653..3758)
                     /locus_tag="Balac_0053"
     CDS             complement(1653..3758)
                     /locus_tag="Balac_0053"
                     /note="COG1874 Beta-galactosidase"
                     /codon_start=1
                     /transl_table=11
                     /product="GH42"
                     /protein_id="ACS45449.1"
                     /translation="MARAYTDPILFGAAYYDEYIPRDLDRIDTDMEMMTRAGINVIRIG
                     ESTWSTCEPQPGHFDWTHIDRALDAATNAGINVIVGTPTYAVPTWLVAMYPDVLATTPA
                     GEPHYGARQIMNIVNPAYRLYGERVIRSLISHVAQQPCVIGYQVDNETKYYDSVSHDMQ
                     VMFIKQLRHEFKNDLEALNEAYGLDYWSNRINAWEDFPDLTGSINESLRARFDRFRRDQ
                     VAEYLAWQASIIREYMRDDQFITHNFDYEWRGHSYGLQPAVDHFRAARALDICGVDIYH
                     PSEDALTGKEIAFGGDMARSAGGGNYLVLETQAQGQHGWLPYPGQLRLQAYSHLASGAD
                     GIMYWHWHSIHNSFETYWRGLLSHDFESNPTYEEAGRFGREIGDPRIGDTLSHLSKRNA
                     VAILASNESLTALSWFHIETGFPMGGTLTYNDVLRSIYDALFELNVEVDFLPADASADQ
                     LAGYSLVIAPALYTTDQQTIDRLARYVKNGGHLLATMRSFVADENVKVWHDKAPHHLVD
                     IFGMTYNQFTRPMGVSLKCPDTLADLAGASANDFIEMLSPAPETHVLAWYDHYAWDSYA
                     AITRHAFGSGDAQWVGTQLQADAWRTVLAEALSNAGVHTPGMELAGTVCVRSGTNTAGD
                     TVTYLLNYSGSPITFRAPASGTFLLGHPTDDGEQAVTAETPVTVGDAVTLPRWGVDIIV
                     GRQPTMN"
     gene            4168..5322
                     /locus_tag="Balac_0054"
     CDS             4168..5322
                     /locus_tag="Balac_0054"
                     /note="COG0477 Permeases of the major facilitator
                     superfamily"
                     /codon_start=1
                     /transl_table=11
                     /product="gnl|TC-DB|J9W1F3|2.A.1.2.93"
                     /protein_id="ACS45450.1"
                     /translation="MFMVAAVLLPQRLRDVMGADAATAAFGVINACTAFISLLSNLVVG
                     NLSDHTRSRFGRRTPWVISGGIVGGVSLALVGFLDNVWLIGISYCVCMIGLNMMIAPVI
                     ATLSDRVPANMRGTMSAFLAGGTAVGSALGQMLGSRFLSNQIPGFLLSGTLMGLAGICT
                     VLVWPKEPSSKHLAKTSNGFGDMLKSFIPPTKGARDFWLAFVGRSLFIFAYYMILNYQL
                     YVLEDYVGQSAQQAGNTIAVMSMVSMIVGLVSSLAGGPISDRIGKRKIMIVLASVLMAV
                     GFVLPWILHSPLSMILFAGFSGFGYGLYGAVDQALNVDVLPNKEEAGKDLGILNIATTL
                     GQMVGPIVTSAVVAATGGYTVVFPVAIGFAAFASLFIMLIKSVR"
     gene            complement(5377..6018)
                     /locus_tag="Balac_0055"
     CDS             complement(5377..6018)
                     /locus_tag="Balac_0055"
                     /note="COG1309 Transcriptional regulator"
                     /codon_start=1
                     /transl_table=11
                     /product="STP|TetR_N"
                     /protein_id="ACS45451.1"
                     /translation="MQPSVEESVNTRTRKSPQQREEEILRATVKLISQRGYNGISLRDV
                     ASEVGMTQQGVLHYVGNKAGLAAMVMKEFYDPTSMPGDFLASGLPGSDRDAPHFPAYLR
                     YVVRENAKRRDLVQMFAILQAESIDPDHPAHDYFEHRPAIIWQTLSNYQWKLPPQIGTW
                     ENFKPLHRMALEAMDGIQLRWLRSDPIDLYDEWIAFERILFPSPVWDNYR"
ORIGIN
        1 atgatgaagg cgctcaagac cactgtgcac tacgatgtga ccgccgggcg aacccatacc
       61 gagcagacgg agctctcggt catggacgag gcgatgaaca ccgagcacat cgtcgaatcg
      121 aatgtggtgg gaatctaccc ggactacacg ttccagatga tggagggcta tggttgctcg
      181 ctcaccgagt cggcatgcta tctgctctcc aaaatggact ccgcgacgcg caaagaggcc
      241 ttggcccaat ggttcggtcc cgctggaatg gacgcttggt tcgtccgcgt acacatcgac
      301 tcctgtgatt actcgctcag tgagtaccag gccgttgagg atcctctggc cgatcccgaa
      361 ttggagacct tctcgattga ccgtgatcgt cagtacattc ttccggtgct caaagaggcg
      421 atggccatgg cggggcatcc cattcatgtg ttgctctccc catggtcgcc tccggcgcaa
      481 tggaagacgc ccccggagat gacgcggaac gacgcctcgg tgtacggcgg cgaggagggc
      541 gatgtcatcg atctgagcaa gccggggcgc tgtttcggcg gaaggctcaa gccggaatac
      601 tattcgtcgt gggcgcggta cctcgtcaga ttcatcagcg cctatatggc cgaaggtgtt
      661 ccggtgacga tgctgtcgat tcagaacgag gcggctgcgg ccacgagttg ggatagctgc
      721 ctgtggaccg gagatcagga gcgcgaattc ctgaagcacc atctctaccc ggcaatggag
      781 gaggccggtc tgaccgatgc cgtgaagatc ttcatctggg atcataacaa ggaacgtgca
      841 atcgaacaca tcgacgagtt catgagcgac ccggaggcgg cgaaggaggt tggcggtttc
      901 gcttatcact ggtactccgg cgaccatttc gaggcgctgt cgatgttgcg aggcaagtat
      961 cccgacaagg tgctgatgca ttccgaaagc tgtgggctgc atatacccgg caaggtgacc
     1021 atgctcgata tgaccgatga acagatcgag gcgctgcccg atggcgacta caagaccatg
     1081 gtgcagacga ccactccgaa cgagatggac ttcaatgatg cgacggccta tgcccacgac
     1141 atcatcggcg acctgaacca tggaatgcag cggtggatcg actggaacat gatcgtcgac
     1201 aggcagggtg gtccccgtca taccccaggg ggtttcgccg cgccgatcgt cgccgaagac
     1261 gacggacggt atacgctgac catcagctac cggtatattc gcgagattgc acaggccatc
     1321 aaaccgaatg cggtggttct cggcacaagc acgtattcgc gtgatatcga ggcggtctcg
     1381 gcccgcaacg cagatggctc aatcggcgtc gtcctcctta atcaggcgga gcgcgatatc
     1441 ccggtgaaca ttcgcatggg cggcctgctt gtggcggatg tgccgttgcc ggcacgcacc
     1501 ttgagtactc tggtgttcac ggagtgatcg tggatcgtcg tcgcacacgt gttgccgata
     1561 tggttgcgcc accggcccaa aggccggtgg cgcaaccata tcgatcgctc ccgtctgctc
     1621 gacgcatcgg attcggtcga gcggaggcag attcaattca ttgtgggttg ccggccgaca
     1681 atgatgtcca ctccccaacg cggcaatgtg acggcatcgc ccacggtcac cggagtttcg
     1741 gcggtgacgg cctgctctcc gtcgtctgtg ggatgtccca gcaggaacgt tcccgaggcg
     1801 ggtgcccgga aggtgatggg cgaccctgaa tagttgagca ggtaggtaac ggtatcgcct
     1861 gccgtgttgg ttccgctccg cacgcagact gtgccggcca gttccatgcc gggggtgtgc
     1921 acgccggcgt tggacagggc ctctgcaagc acggtgcgcc atgcatccgc ctgaagctgc
     1981 gtgcccaccc actgcgcatc tccggaaccg aatgcatgtc tggtgatcgc cgcatatgaa
     2041 tcccaggcat aatggtcgta ccaagcgagt acgtgggttt ccggagccgg ggagagcatc
     2101 tcgatgaagt cgtttgcaga cgcgccggcg aggtcggcca aagtgtcggg gcatttgagc
     2161 gatacaccca tcggacgagt gaactggttg taggtcatgc caaatatgtc gacaagatga
     2221 tgcggtgcct tgtcgtgcca cactttcacg ttctcgtccg caacgaatga ccgcatggtg
     2281 gcgagcagat gaccgccatt cttaacatac cgcgccaatc ggtcgatggt ctgctgatcc
     2341 gtggtataca atgcgggtgc gatcaccagg gagtaaccgg cgagttggtc tgcgctcgca
     2401 tctgcgggca ggaaatcgac ctccacattg agctcgaaca atgcatcgta tatggatcgc
     2461 aacacgtcgt tgtatgtgag cgtgccgccc atggggaatc ccgtttcgat gtggaaccag
     2521 gacagcgcgg tgagcgactc gttgctggcg aggattgcca ccgcattgcg ttttgacaga
     2581 tgactgagcg tgtctccgat acgcgggtcg ccgatctcgc gtccaaacct cccggcctcc
     2641 tcgtaggtgg gattgctctc gaaatcgtgc gacagcagtc cgcgccaata cgtttcgaac
     2701 gaattgtgaa ttgaatgcca atgccagtac atgattccat ccgcaccgga tgcgagatga
     2761 ctgtaggctt gaaggcgcaa ttggcctggg tacggcagcc aaccatgctg accctgtgcc
     2821 tgcgtttcga gcaccaggta attgccgccg cctgccgaac gtgccatgtc gccgccgaat
     2881 gcgatctcct tgccggtgag tgcatcctcg ctcggatggt agatgtcgac gccgcagatg
     2941 tcgagtgcgc gggcggcacg gaaatggtcg accgcaggct gtaacccata ggaatgaccg
     3001 cgccattcgt aatcgaaatt atgagtgatg aactggtcgt cgcgcatata ctcccgaata
     3061 atgctcgcct gccatgcaag atactccgcc acttgatcgc ggcggaacct gtcgaatcgc
     3121 gcgcgcaacg actcgttgat cgaaccggtg agatccggga agtcctccca cgcattgatc
     3181 cgattcgacc agtaatccaa gccgtacgcc tcgttcaatg cctcgaggtc gttcttgaat
     3241 tcgtggcgta gttgtttgat gaacatcacc tgcatgtcgt gggagacgga atcgtagtat
     3301 ttcgtctcat tgtctacctg atagccgatg acgcaaggct gctgtgccac gtgggagatg
     3361 agggatcgga tcaccctctc gccgtaaagg cggtaggccg ggttgacgat gttcatgatt
     3421 tgccgcgccc cgtagtgggg ttccccggcc ggtgtggtgg caaggacgtc cggatacatg
     3481 gcgacgagcc atgtgggtac cgcataggtc ggggttccca caatcacgtt gattccggcg
     3541 ttggtcgccg cgtcgagcgc gcggtcgatg tgcgtccagt cgaaatgccc gggctggggt
     3601 tcgcatgtgg accacgtgga ttcgccgatg cgaatgacgt tgatgcccgc tcgggtcatc
     3661 atctccatgt cggtgtcaat gcgatccaga tcgcgcggga tgtattcatc atagtatgct
     3721 gcgccgaaca gaatggggtc ggtgtatgcg cgggccatgt gtctctcctt ggttccgcta
     3781 tgtgttgtgc aaggtgaacg gtggggcggc attgccccta ccgcaagcgt cgtatatgtc
     3841 cagattatct actttatggt agatataaga agtatcgtac cgggtctcat cttcctccgc
     3901 aaatgatgaa tccatctgcg ttgtatagac aacttaactg atttcgcagc ttctttggct
     3961 cggtgtatat tgtgaaacac atttaactat taggtggtag ttaaatgtgt tttacgcaac
     4021 ccttccagtt ccagtttggt tctactatca aaggagatag agatgtcaac tgtttcattg
     4081 gagcaaacgt cgtctgcgct cagtcggagc gatagaatac gtctgctcgc atcgttcctg
     4141 gtgtttcccc tgttgtggtg ctcgggcttg ttcatggtcg cggccgtcct gttgcctcag
     4201 cgcttgcgcg acgtgatggg agcggatgcg gcgactgctg cattcggcgt catcaatgca
     4261 tgcacggcgt tcatctcgct gctgtccaat ctcgttgtgg gcaatttgtc ggaccacact
     4321 cgctcgagat tcggccggcg caccccctgg gtcatttctg gcggcattgt cggcggcgta
     4381 tcgcttgcac tggtcggttt ccttgacaat gtatggctga tcggcatcag ctactgcgta
     4441 tgcatgattg gcctgaacat gatgatcgcg ccggtcattg cgaccctgtc cgaccgagtg
     4501 ccggccaata tgcgtggcac gatgtctgcg ttccttgccg gtggtaccgc ggtgggcagc
     4561 gctctcgggc agatgctggg gtcgaggttc ctctccaatc agatccccgg attcctgctc
     4621 agcggcactc tgatggggct ggcaggaatc tgcacggtgc tggtctggcc aaaggagccg
     4681 agttcgaagc atctggcaaa gacgtccaac ggtttcgggg atatgctcaa atccttcatc
     4741 ccccccacca aaggcgcccg tgatttctgg ctggcgttcg tggggcgttc cctgttcatc
     4801 ttcgcgtact acatgatact caattaccaa ctgtatgtgc ttgaggatta cgtcggacag
     4861 tcagcgcagc aggcgggtaa cacaatcgcc gtgatgtcga tggtctcgat gattgtgggc
     4921 ctggtgtcct cgcttgccgg tggccccatt tccgacagga tcggcaaacg caagatcatg
     4981 atcgttcttg cgagtgtgct gatggcggtt ggttttgtgc tgccttggat tctgcacagc
     5041 ccgttgtcca tgatcctgtt cgcagggttc tccggattcg gttatggcct gtatggtgcc
     5101 gtcgaccaag ctctgaacgt cgatgtgctt cccaacaaag aggaggcggg gaaggatctg
     5161 ggcattctca acatcgcaac gacgctgggg cagatggtcg ggccgatcgt cacttcggcc
     5221 gttgtggccg cgaccggcgg ttatacggtg gtcttcccgg tggccattgg attcgccgca
     5281 ttcgcgtcac tcttcatcat gctgatcaaa agcgtgcggt aggggtcgag ccatgtggtg
     5341 tgatgatacg cgtatgccgc atggcccgat cggtacttac cggtagttgt cccaaacggg
     5401 cgaggggaac agtatgcgtt cgaaggcgat ccattcgtcg tacaggtcaa tcgggtcgga
     5461 acgcagccat cgcaattgga tgccgtccat tgcttcgagg gccatgcggt gcagtggctt
     5521 gaagttctcc caagtgccga tctgcggtgg aagtttccat tggtagttgc tgagcgtctg
     5581 ccagatgatt gcaggtctgt gctcgaaata gtcgtgggcc gggtgatccg ggtcaatgga
     5641 ctcggcctgc agaatggcga acatctgcac cagatcgcgg cgcttggcgt tctctctcac
     5701 cacatagcgc aagtaggcgg ggaagtgcgg cgcatcccgg tcgctgcctg gcagcccgct
     5761 cgcaaggaag tcccctggca tgcttgtggg gtcgtagaac tccttcatca ccatcgcagc
     5821 caatccggcc ttgttgccca cgtaatgcag tacgccctgc tgggtcattc ccacttcgga
     5881 tgcgacatct cgcagggaga tgccgttgta gccccgttgg gagatgagtt tgacggtggc
     5941 gcggagaatc tcctcctcac gctgttgcgg ggatttgcgt gtgcgtgtgt tcacggattc
     6001 ctccacggaa ggctgcat
//
