# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/CBM35/fasta_for_each_cluster/cluster_193.txt # target HMM database: merged_hmms/CBM35.hmm # per-dom hits tabular output: hmmscan_out/domain_result/CBM35/CBM35_cluster_193.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: USK36718.1|CBM35|CBM6 [L=1068] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.8e-24 72.4 20.2 7.8e-16 45.6 1.6 5.2 4 CBM35.hmm Domain annotation for each model (and alignments): >> CBM35.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.6 1.6 3.9e-16 7.8e-16 1 119 [] 299 419 .. 299 419 .. 0.85 2 ! 2.6 1.5 0.008 0.016 27 87 .. 496 552 .. 443 578 .. 0.65 3 ! 33.8 0.4 1.8e-12 3.5e-12 22 107 .. 740 824 .. 719 836 .. 0.84 4 ? -1.5 0.1 0.16 0.31 32 44 .. 883 895 .. 875 928 .. 0.68 Alignments for each domain: == domain 1 score: 45.6 bits; conditional E-value: 3.9e-16 CBM35.hmm 1 yeAedasltgvsvntnhagysGsgfvdglqaagdavt.fnvdv.pkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdt 86 yeAed + + + + sG ++v ++++ +++++ ++vd ++G+ l++rYa+ +++++t ++vnG++v++++fp+tg+ ++ USK36718.1|CBM35|CBM6 299 YEAEDSVFAYA-TSGDDINPSGGKYV-NMNNGKAYIEsLKVDGgASGGNKILKIRYAT-DAANATEGLYVNGARVQTLSFPTTGSMSS 383 78887766655.666778889*****.566777777625598756789999*******.8**************************** PP CBM35.hmm 87 wgtaagtvtLkaGk.ntitiks..dwGwinldslel 119 +++ a+ v+L+ G+ n+i iks + +n+d++++ USK36718.1|CBM35|CBM6 384 YNELAVPVELNPGSnNKIVIKSdgNAAGVNIDKFQI 419 *************6268****987778889999875 PP == domain 2 score: 2.6 bits; conditional E-value: 0.008 CBM35.hmm 27 dglqaagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpst.gnwdtw 87 +g +++++++ n d ++ Y++ l +ang ++s+vvnG+ + + t g+w+++ USK36718.1|CBM35|CBM6 496 NGAASKSQRILSNGDGDD-NGYSIMLDHANG----DKVSLVVNGKPIARSETALTaGQWTNI 552 334444444444444333.337777777774....667888888887744444333677764 PP == domain 3 score: 33.8 bits; conditional E-value: 1.8e-12 CBM35.hmm 22 GsgfvdglqaagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtvtLkaGkntitiks 107 G + ++ +++d +++nvdv k+G Y+l ++ +++g+t ++++ v+G + ++f + g wd++ + +tv L++G+++i+++ USK36718.1|CBM35|CBM6 740 GPAYRVNYIEKDDWMEYNVDVAKSGFYQLDYKVGTAPGKTGEVEFEVDGVPQTRTSFST-GGWDNYVIKSETVALSEGSHKIRLNV 824 55555566688999***************************************999975.58********************9986 PP == domain 4 score: -1.5 bits; conditional E-value: 0.16 CBM35.hmm 32 agdavtfnvdvpk 44 +++vt+nvd+ + USK36718.1|CBM35|CBM6 883 GKAKVTWNVDASD 895 4566777776643 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1068 residues searched) Target model(s): 2 (268 nodes) Passed MSV filter: 1 (0.5); expected 0.0 (0.02) Passed bias filter: 1 (0.5); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 115.04 // Query: USK36683.1|CBM35|CBM6 [L=1067] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.7e-25 74.5 7.4 2e-17 50.7 2.6 4.8 4 CBM35.hmm Domain annotation for each model (and alignments): >> CBM35.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 50.7 2.6 1e-17 2e-17 1 119 [] 299 418 .. 299 418 .. 0.88 2 ? -1.2 1.8 0.12 0.24 48 72 .. 515 535 .. 443 572 .. 0.56 3 ! 35.5 0.2 5.1e-13 1e-12 26 118 .. 745 835 .. 730 836 .. 0.89 4 ? -2.2 0.3 0.25 0.5 44 52 .. 907 915 .. 874 954 .. 0.50 Alignments for each domain: == domain 1 score: 50.7 bits; conditional E-value: 1e-17 CBM35.hmm 1 yeAedasltgvsvntnhagysGsgfvdglqaagdavt.fnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtw 87 yeAed + + + + sG ++v +++ +++++ ++vd ++G+ l++rYa+ ++++ t+ ++vnG+kv++++fp+tg+ +++ USK36683.1|CBM35|CBM6 299 YEAEDSVFAYA-TSGDDINLSGGKYV-NMNHGSAYIEsLKVDGASGGNKILKIRYAT-DAANVTKGLYVNGAKVQTLSFPTTGSTSSY 383 88888776655.77788999******.5767777876256*****************.8***************************** PP CBM35.hmm 88 gtaagtvtLkaG.kntitiks..dwGwinldslel 119 ++ a+ v+L++G +n+i iks + +n+d++++ USK36683.1|CBM35|CBM6 384 NELAVPVELNQGpNNKIVIKSdgNAAGVNIDKFQI 418 ************7789****988778889999875 PP == domain 2 score: -1.2 bits; conditional E-value: 0.12 CBM35.hmm 48 YelslrYangtgstktlsvvvnGtk 72 Y++ l + +g ++s+ vnG+ USK36683.1|CBM35|CBM6 515 YSIVLDHDQG----DKVSIAVNGQT 535 3333333332....34455555544 PP == domain 3 score: 35.5 bits; conditional E-value: 5.1e-13 CBM35.hmm 26 vdglqaagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtvtLkaGkntitiksdwGwin 113 v g ++gd ++++vdv k+G Y+l+++ a+ + +t + ++ v+G + ++f + g w+ + + +tv L++G+++i+++ + + USK36683.1|CBM35|CBM6 745 VVGALEKGDWMEYHVDVAKSGFYQLNYKVAS-GIQTGEIEFQVDGVPQTRTSFST-GGWNRYVIKSETVALSEGSHKIRLNVNAAYWL 830 55666899***********************.6****************999975.58***********************9888777 PP CBM35.hmm 114 ldsle 118 l ++e USK36683.1|CBM35|CBM6 831 LRWFE 835 77766 PP == domain 4 score: -2.2 bits; conditional E-value: 0.25 CBM35.hmm 44 kaGsYelsl 52 +G+ +l + USK36683.1|CBM35|CBM6 907 VTGKVTLPI 915 223333333 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1067 residues searched) Target model(s): 2 (268 nodes) Passed MSV filter: 1 (0.5); expected 0.0 (0.02) Passed bias filter: 1 (0.5); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 118.79 // Query: USK36695.1|CBM35|CBM6 [L=868] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.6e-27 82.1 11.4 1.7e-15 44.5 1.6 4.0 4 CBM35.hmm Domain annotation for each model (and alignments): >> CBM35.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 44.5 1.6 8.3e-16 1.7e-15 1 119 [] 334 454 .. 334 454 .. 0.90 2 ? -0.8 0.2 0.091 0.18 61 87 .. 560 587 .. 531 605 .. 0.69 3 ? -1.3 0.1 0.13 0.26 65 87 .. 564 587 .. 558 621 .. 0.55 4 ! 41.4 0.1 7.6e-15 1.5e-14 31 109 .. 777 853 .. 760 863 .. 0.87 Alignments for each domain: == domain 1 score: 44.5 bits; conditional E-value: 8.3e-16 CBM35.hmm 1 yeAedasltgvsvntnhagysGsgfvdglqaagdavtfn.vdv.pkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdt 86 yeAed+ + + ++ + sGs++v ++++ +++++ vd ++G+ l++ Ya+ +++++++ v+vnGtkv+++++p+tg ++ USK36695.1|CBM35|CBM6 334 YEAEDGVFAYA-TMSDDVNASGSKVV-NMNDGRAYLEMLrVDGgASGGNKILKIGYAT-DAANASMGVYVNGTKVQTLSVPTTGGMSS 418 99***999877.77889999****99.577888888876699856789999*******.8**************************** PP CBM35.hmm 87 wgtaagtvtLkaG.kntitiks..dwGwinldslel 119 +++ a+ + L+ G +n+i iks + +n+d+l++ USK36695.1|CBM35|CBM6 419 YNDLAVAIDLNPGpNNKIVIKSdgNAAGMNIDKLQI 454 *************7789*****8888889****986 PP == domain 2 score: -0.8 bits; conditional E-value: 0.091 CBM35.hmm 61 tktlsvvvnGtkvs.evtfpstgnwdtw 87 ++s+ +nG+k+ + t + g+w+++ USK36695.1|CBM35|CBM6 560 GDKVSIAINGQKILgSQTALTAGQWTNI 587 3567888888877534444444677664 PP == domain 3 score: -1.3 bits; conditional E-value: 0.13 CBM35.hmm 65 svvvnGtkvs.evtfpstgnwdtw 87 s+ +nG+k+ + t + g+w+++ USK36695.1|CBM35|CBM6 564 SIAINGQKILgSQTALTAGQWTNI 587 555566555423333333455543 PP == domain 4 score: 41.4 bits; conditional E-value: 7.6e-15 CBM35.hmm 31 aagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtvtLkaGkntitiksdw 109 +++ + + v+v+++G+Y+ + a+ ++ +++v+G +++++++pstg w++w+t tv+L++G++t+++k ++ USK36695.1|CBM35|CBM6 777 TKNTWLDYVVNVESTGTYRADFLVAAP--GDGAIDFIVDGVYQKTISLPSTGGWTSWKTRSDTVELSKGAHTVRLKIKQ 853 556667788****************95..88999****************************************99744 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (868 residues searched) Target model(s): 2 (268 nodes) Passed MSV filter: 1 (0.5); expected 0.0 (0.02) Passed bias filter: 1 (0.5); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 106.64 // Query: USK36692.1|CBM35|CBM6 [L=1106] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4e-21 62.6 4.8 1.3e-16 48.0 1.9 5.9 8 CBM35.hmm Domain annotation for each model (and alignments): >> CBM35.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 48.0 1.9 6.7e-17 1.3e-16 1 119 [] 251 370 .. 251 370 .. 0.87 2 ? -0.6 1.0 0.083 0.17 48 72 .. 467 487 .. 394 514 .. 0.53 3 ? -0.4 0.7 0.069 0.14 58 74 .. 506 522 .. 447 541 .. 0.56 4 ? -3.0 0.1 0.44 0.87 72 94 .. 617 639 .. 600 655 .. 0.53 5 ! 24.7 0.1 1.1e-09 2.3e-09 31 107 .. 699 778 .. 688 790 .. 0.86 6 ? -3.4 0.1 0.61 1.2 41 95 .. 844 865 .. 828 871 .. 0.41 7 ? 1.1 0.1 0.024 0.047 11 76 .. 916 982 .. 909 994 .. 0.76 8 ? -3.2 0.1 0.52 1 54 75 .. 1018 1039 .. 1016 1044 .. 0.71 Alignments for each domain: == domain 1 score: 48.0 bits; conditional E-value: 6.7e-17 CBM35.hmm 1 yeAedasltgvsvntnhagysGsgfvdglqaagdavt.fnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtw 87 yeAed + + + + sG ++v +++ +++++ ++vd ++G+ l++rYa+ ++++ + ++vnG+kv++++fp+tg+ +++ USK36692.1|CBM35|CBM6 251 YEAEDSVFAYA-TSGDDINPSGGKYV-NMNHGSAYIEsLKVDGASGGNKILKIRYAT-DAANVAKGLYVNGAKVQTLSFPTTGSTSSY 335 78887776655.667778889*****.5767777876256*****************.8***************************** PP CBM35.hmm 88 gtaagtvtLkaG.kntitiks..dwGwinldslel 119 ++ ++ v+L++G +n+i iks + +n+d++++ USK36692.1|CBM35|CBM6 336 NDLVVPVELNQGpNNKIVIKSdgNAAGVNIDKFQI 370 ************7789****988778889999875 PP == domain 2 score: -0.6 bits; conditional E-value: 0.083 CBM35.hmm 48 YelslrYangtgstktlsvvvnGtk 72 Y++ l + +g ++s+ vnG+ USK36692.1|CBM35|CBM6 467 YSIVLDHDQG----DKVSIAVNGQT 487 3333333332....34455555544 PP == domain 3 score: -0.4 bits; conditional E-value: 0.069 CBM35.hmm 58 tgstktlsvvvnGtkvs 74 ++ t ++++nG++v USK36692.1|CBM35|CBM6 506 ARKSGTWKLYINGNSVP 522 23344455666666655 PP == domain 4 score: -3.0 bits; conditional E-value: 0.44 CBM35.hmm 72 kvsevtfpstgnwdtwgtaagtv 94 kv++vt++ + ++++++ ++++ USK36692.1|CBM35|CBM6 617 KVENVTVDHITGFKSFRKGKVQL 639 23355555555555543333333 PP == domain 5 score: 24.7 bits; conditional E-value: 1.1e-09 CBM35.hmm 31 aagdavtfnvdvpkaGsYelslr....Yang.tgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtvtLkaGkntitiks 107 ++gd ++++vdv k+G Y+++++ ++++ + + ++ ++ v+G + +tf ++ w+ + tv L++G+++i++k+ USK36692.1|CBM35|CBM6 699 EKGDWMEYHVDVAKSGFYQVNYKvatsWSQNgKFGPAEIEFQVDGVPQTRTTFLNS-HWNY-VIKSDTVALSEGSHKIRLKA 778 689999**********999999866665555599999****************999.8*99.78899*************98 PP == domain 6 score: -3.4 bits; conditional E-value: 0.61 CBM35.hmm 41 dvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtvt 95 + s ++ + t++ + t++g+vt USK36692.1|CBM35|CBM6 844 N--------------------------------S-ASYDPTATTAQTFTVTGKVT 865 2................................2.22222222222234455555 PP == domain 7 score: 1.1 bits; conditional E-value: 0.024 CBM35.hmm 11 vsvntnhagysGsgfvdglqaagdavtfn..vdvpkaGsYelslrYangtgstktlsvvvnGtkvsev 76 + vn+ ++ sG+ + + g++ +fn + +k+G+ ++sl +++++ +t+t+s++ n+++ + USK36692.1|CBM35|CBM6 916 TLVNNPTWTDSGKDGALAF-SGGSRAEFNssATLNKTGDESVSLWFKTSQPATSTTSIFRNNNRFTAL 982 5566666666776666566.556666776447779**************99*******9999877655 PP == domain 8 score: -3.2 bits; conditional E-value: 0.52 CBM35.hmm 54 YangtgstktlsvvvnGtkvse 75 Y ++ + ++++v+G+ v + USK36692.1|CBM35|CBM6 1018 YVASYDHSTGMKIYVDGNLVTS 1039 666556667799****998875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1106 residues searched) Target model(s): 2 (268 nodes) Passed MSV filter: 1 (0.5); expected 0.0 (0.02) Passed bias filter: 1 (0.5); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 110.27 // Query: USK36707.1|CBM35|CBM6 [L=1068] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.5e-23 68.7 2.0 7.5e-16 45.6 1.2 5.1 6 CBM35.hmm Domain annotation for each model (and alignments): >> CBM35.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.6 1.2 3.8e-16 7.5e-16 1 119 [] 302 422 .. 302 422 .. 0.85 2 ? -1.2 1.3 0.13 0.25 39 66 .. 481 508 .. 441 561 .. 0.54 3 ? -1.6 0.1 0.16 0.32 58 58 .. 558 558 .. 517 591 .. 0.57 4 ? -2.5 0.2 0.32 0.64 67 116 .. 658 707 .. 646 710 .. 0.61 5 ! 31.0 0.0 1.3e-11 2.6e-11 31 118 .. 753 837 .. 734 838 .. 0.90 6 ? -1.3 0.1 0.14 0.27 29 44 .. 880 895 .. 874 917 .. 0.82 Alignments for each domain: == domain 1 score: 45.6 bits; conditional E-value: 3.8e-16 CBM35.hmm 1 yeAedasltgvsvntnhagysGsgfvdglqaagdavt.fnvdv.pkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdt 86 yeAed + + + + sG ++v +++ +++++ ++vd ++G+ l++rYa+ +++++t+ ++vnG+kv++++fp+tg+ ++ USK36707.1|CBM35|CBM6 302 YEAEDSVFAYA-TSGDDINPSGGKYV-NMNHVSAYIEsLKVDGgASGGNKILKIRYAT-DAANATKGIYVNGAKVQTLSFPTTGSMSS 386 78887766654.66677888999999.577888888624588756789999*******.8**************************** PP CBM35.hmm 87 wgtaagtvtLkaG.kntitiks..dwGwinldslel 119 +++ a+ v+L+ G +n+i i+s + +n+d++++ USK36707.1|CBM35|CBM6 387 YNELAVPVELNPGpNNKIVIQSdgNAAGVNIDKIQI 422 *************7789****98888889****986 PP == domain 2 score: -1.2 bits; conditional E-value: 0.13 CBM35.hmm 39 nvdvpkaGsYelslrYangtgstktlsv 66 + ++k+ + +l++ + +++++ ++++ USK36707.1|CBM35|CBM6 481 DLVSNKQNNVTLTTWVKWNGATSGSQQI 508 3222222222222222222222222222 PP == domain 3 score: -1.6 bits; conditional E-value: 0.16 CBM35.hmm 58 t 58 USK36707.1|CBM35|CBM6 558 A 558 1 PP == domain 4 score: -2.5 bits; conditional E-value: 0.32 CBM35.hmm 67 vvnGtkvs.evtfpstgnwdtwgtaagtvtLkaGkn.titiksdwGwinlds 116 vv Gt+++ ++++++ ++ t +vtLk+G t+t++ ++ +n++ USK36707.1|CBM35|CBM6 658 VVTGTYSDgTTKVENVTDDHI--TGFDSVTLKEGVPlTVTVGGKTASFNVNI 707 566666654555555543333..67778888888532566665655566655 PP == domain 5 score: 31.0 bits; conditional E-value: 1.3e-11 CBM35.hmm 31 aagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtvtLkaGkntitiksdwGwinldsle 118 ++g+ +++nvdv k+G Y++++r a+ + +++++ v+G + + f tg+w+ + + t++L++G+++i++++++G+ l ++e USK36707.1|CBM35|CBM6 753 EKGEWMEYNVDVAKSGFYQVNYRVAT--WRPAEVEFQVDGVPQTRTPFS-TGSWRPGTFSSDTIKLSEGSHKIRLNANTGFWRLLWFE 837 5677899*****************97..9*************9999996.569*9989999*******************99887766 PP == domain 6 score: -1.3 bits; conditional E-value: 0.14 CBM35.hmm 29 lqaagdavtfnvdvpk 44 l + +++vt+nvd+ + USK36707.1|CBM35|CBM6 880 LGNVNANVTWNVDASN 895 6678899999999864 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1068 residues searched) Target model(s): 2 (268 nodes) Passed MSV filter: 1 (0.5); expected 0.0 (0.02) Passed bias filter: 1 (0.5); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 118.46 // Query: XRG79028.1|CBM35|CBM6 [L=1146] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3e-27 82.4 21.0 2.8e-16 47.0 1.7 5.3 5 CBM35.hmm Domain annotation for each model (and alignments): >> CBM35.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 47.0 1.7 1.4e-16 2.8e-16 1 119 [] 303 423 .. 303 423 .. 0.90 2 ? 0.4 0.5 0.038 0.077 5 74 .. 448 517 .. 446 535 .. 0.86 3 ? -1.6 0.0 0.17 0.33 62 86 .. 530 555 .. 516 573 .. 0.68 4 ! 45.0 0.3 6.1e-16 1.2e-15 31 118 .. 753 841 .. 746 842 .. 0.92 5 ? -0.7 0.1 0.084 0.17 10 67 .. 968 1026 .. 962 1047 .. 0.77 Alignments for each domain: == domain 1 score: 47.0 bits; conditional E-value: 1.4e-16 CBM35.hmm 1 yeAedasltgvsvntnhagysGsgfvdglqaagdavtfn.vdv.pkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdt 86 yeAe+ + + + + sG ++v +++ +++++ + vd +++G+ l++rYa+ ++++ + ++vnG+kv++++fp+tg ++ XRG79028.1|CBM35|CBM6 303 YEAEESVFAYA-TSGDDINLSGGKYV-NMNHGSAYIESHkVDGgDSGGNKILKIRYAT-DAANVAKGLYVNGAKVQTLSFPTTGGMNS 387 78887666554.77788999******.6889999999998998678899*********.8**************************** PP CBM35.hmm 87 wgtaagtvtLkaG.kntitiks..dwGwinldslel 119 +++ a+ v+L+ G +n+i iks + +n+d++++ XRG79028.1|CBM35|CBM6 388 YNDLAVPVELNPGpNNKIVIKSdgNAASVNIDKIQI 423 *************7789*****8888889****986 PP == domain 2 score: 0.4 bits; conditional E-value: 0.038 CBM35.hmm 5 dasltgvsvntnhagysGsgfvdglqaagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvs 74 +a+l g++v ++ +++Gs + a+g++ + + ++k+ + +ls + ++ +++++++ nG+ s XRG79028.1|CBM35|CBM6 448 NATLHGSAVSDKTDKMEGSASLSLNGAEGNYASADLASNKQNNLTLSAWVKWNGETSESQQILSNGDGLS 517 6899999999999999999999999999999999999999999999998888889999999999998776 PP == domain 3 score: -1.6 bits; conditional E-value: 0.17 CBM35.hmm 62 ktlsvvvnGtkvs.evtfpstgnwdt 86 ++s+v+nG+ + + t + g+w++ XRG79028.1|CBM35|CBM6 530 DKVSIVINGQTILgSQTALTAGQWTN 555 56788999887653445555567776 PP == domain 4 score: 45.0 bits; conditional E-value: 6.1e-16 CBM35.hmm 31 aagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtw.gtaagtvtLkaGkntitiksdwGwinldsl 117 ++gd ++++vdv+++G+Y+l +r +++ +t ++++ v+G + +++f +tg w tw + +a v+L++G ++i+++ + + l ++ XRG79028.1|CBM35|CBM6 753 NKGDWMEYKVDVKSSGTYQLAYRVGTAPDKTGEVEFLVDGVPQTKTSFSNTGGWYTWgNRTADYVKLSEGPHKIRLNVTEAYWTLRWF 840 78999****************************************************8888999************998777777776 PP CBM35.hmm 118 e 118 e XRG79028.1|CBM35|CBM6 841 E 841 5 PP == domain 5 score: -0.7 bits; conditional E-value: 0.084 CBM35.hmm 10 gvsvntnhagysGsgfvdglqaagdavtfn..vdvpkaGsYelslrYangtgstktlsvv 67 g+ vn+ ++ sG+g + + g++ +fn + +k+G+ ++s+ +++++ +t t+s++ XRG79028.1|CBM35|CBM6 968 GTLVNNPTWTDSGKGGALAF-SGGSRAEFNssATLNKTGDESVSFWFKTSQPATGTTSIF 1026 46688888888999988888.667777777557779999999999999887777777765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1146 residues searched) Target model(s): 2 (268 nodes) Passed MSV filter: 1 (0.5); expected 0.0 (0.02) Passed bias filter: 1 (0.5); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 135.72 // Query: UVI29375.1|CBM35|CBM6 [L=1066] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.9e-23 68.3 4.5 3.4e-14 40.3 0.3 5.4 7 CBM35.hmm Domain annotation for each model (and alignments): >> CBM35.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -4.2 0.1 1 2 16 37 .. 57 78 .. 55 89 .. 0.66 2 ! 39.0 0.5 4.4e-14 8.8e-14 1 118 [. 304 423 .. 304 424 .. 0.83 3 ! 4.1 0.4 0.0029 0.0057 47 88 .. 522 560 .. 476 565 .. 0.70 4 ? -1.6 0.3 0.17 0.34 66 117 .. 661 712 .. 647 714 .. 0.69 5 ! 40.3 0.3 1.7e-14 3.4e-14 24 113 .. 744 830 .. 737 838 .. 0.88 6 ? -1.9 0.2 0.21 0.42 42 56 .. 904 918 .. 873 952 .. 0.54 7 ? -3.8 0.1 0.77 1.5 61 86 .. 1016 1042 .. 1012 1047 .. 0.64 Alignments for each domain: == domain 1 score: -4.2 bits; conditional E-value: 1 CBM35.hmm 16 nhagysGsgfvdglqaagdavt 37 nh+g +++ + d ++++ +a+ UVI29375.1|CBM35|CBM6 57 NHTGNTAKAVTDAVNNNASAIV 78 6677777777777666666654 PP == domain 2 score: 39.0 bits; conditional E-value: 4.4e-14 CBM35.hmm 1 yeAedasltgvsvntnhagysGsgfvdglqaagdavt.fnvdv.pkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdt 86 yeAed + + + + sG ++v +++ +++++ ++vd ++G+ ++lrYa+ +++++ + ++vnG+kv+++++p+tg+ ++ UVI29375.1|CBM35|CBM6 304 YEAEDSVFAYA-TSGDDINLSGGKVV-NMNHGSAYIEsLKVDGgASGGNKIFKLRYAT-DAANAARGLYVNGAKVQTLSIPTTGSMSS 388 78887766655.66677888898888.5767777776245887467789999******.8**************************** PP CBM35.hmm 87 wgtaagtvtLkaG.kntitiks..dwGwinldsle 118 +++ a+ ++L+ G +n+i iks + +n+d+++ UVI29375.1|CBM35|CBM6 389 YNDLAVPIELNPGpNNKIVIKSdgNAAGVNIDKFH 423 *************7789****98777788999986 PP == domain 3 score: 4.1 bits; conditional E-value: 0.0029 CBM35.hmm 47 sYelslrYangtgstktlsvvvnGtkvsevtfpst.gnwdtwg 88 Y++ l +ang ++s+vvnG+++ + t g+w++++ UVI29375.1|CBM35|CBM6 522 GYSIMLDHANG----DKVSIVVNGEQIARSETALTaGQWTNIT 560 37888888885....889********99555554448998855 PP == domain 4 score: -1.6 bits; conditional E-value: 0.17 CBM35.hmm 66 vvvnGtkvs.evtfpstgnwdtwgtaagtvtLkaGkn.titiksdwGwinldsl 117 +vv Gt+++ ++++++ ++ + t ++tLk+G++ t+t+ ++ +n++ l UVI29375.1|CBM35|CBM6 661 LVVTGTYSDgTTKVEKVTDDNI--TGFDNATLKEGAQlTVTLAGKTASFNVNFL 712 6777777775666777666666..888899999998646666666666666655 PP == domain 5 score: 40.3 bits; conditional E-value: 1.7e-14 CBM35.hmm 24 gfvdglqaagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtvtLkaGkntitiksdwGw 111 g v+ l ++gd +++nvdv k+G Y+l++r a+++g t ++++ v+G + ++f ++ nw+ + +tv L++G+++i+++ + + UVI29375.1|CBM35|CBM6 744 GTVN-LLEKGDWMEYNVDVAKSGFYQLNYRVASKPGYTGVVEFQVDGVPQTRTSFSTS-NWNF-VIKSETVRLSEGSHKIRLNVTEAY 828 5564.4599**********************************************887.9**9.88999*************985555 PP CBM35.hmm 112 in 113 UVI29375.1|CBM35|CBM6 829 WV 830 44 PP == domain 6 score: -1.9 bits; conditional E-value: 0.21 CBM35.hmm 42 vpkaGsYelslrYan 56 + +G+ +l + an UVI29375.1|CBM35|CBM6 904 FTVTGQVTLPIGVAN 918 223344444444444 PP == domain 7 score: -3.8 bits; conditional E-value: 0.77 CBM35.hmm 61 tktlsvvvnGtkvsevtfpst.gnwdt 86 t t+s + n++++ +vtfp + +w + UVI29375.1|CBM35|CBM6 1016 TVTVSGIPNDGSAYSVTFPDKtVTWVK 1042 555555557777778888877456655 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1066 residues searched) Target model(s): 2 (268 nodes) Passed MSV filter: 1 (0.5); expected 0.0 (0.02) Passed bias filter: 1 (0.5); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 151.19 // Query: BFR77563.1|CBM35|CBM6 [L=1744] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.3e-31 96.5 38.0 1.1e-16 48.3 3.4 6.3 6 CBM35.hmm Domain annotation for each model (and alignments): >> CBM35.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.3 1.3 3e-13 6e-13 1 119 [] 306 427 .. 306 427 .. 0.86 2 ? -1.8 0.5 0.18 0.37 58 71 .. 505 518 .. 453 566 .. 0.51 3 ! 34.4 1.2 1.1e-12 2.3e-12 28 109 .. 754 835 .. 734 847 .. 0.84 4 ? -2.8 0.1 0.38 0.77 63 99 .. 894 925 .. 880 927 .. 0.54 5 ! 48.3 3.4 5.5e-17 1.1e-16 9 119 .] 961 1066 .. 952 1066 .. 0.87 6 ? -1.1 0.5 0.11 0.22 8 71 .. 1576 1635 .. 1550 1677 .. 0.69 Alignments for each domain: == domain 1 score: 36.3 bits; conditional E-value: 3e-13 CBM35.hmm 1 yeAedasltgvsvntnhagysGsgfvdglqaagdavt.fnvdv.pkaGsYelslrYangtgstktlsvvvnGtkvs.evtfpstgnwd 85 yeAed t + ++ + + sG ++v +++++ ++++ ++vd ++G+ l+++Ya+ ++++ t ++vnG +v+ +++fp+tg+ + BFR77563.1|CBM35|CBM6 306 YEAEDRVFTYA-TQRDDVNASGGKVV-NMNDSRAYIEsLKVDGgAAGGNKILKISYAT-DAANVTEGIYVNGVQVQnKLSFPTTGSMS 390 88998877766.78888889998888.577777777625699845678999*******.8***************999********** PP CBM35.hmm 86 twgtaagtvtLkaG.kntitiks..dwGwinldslel 119 ++++ ++ ++L+ G +n+i i+s + in+d+l++ BFR77563.1|CBM35|CBM6 391 SYSDLTVPIELNPGpNNKIVIQSdvTTAGINIDKLQI 427 **************7789*****9888999***9986 PP == domain 2 score: -1.8 bits; conditional E-value: 0.18 CBM35.hmm 58 tgstktlsvvvnGt 71 ++++ ++++ nG+ BFR77563.1|CBM35|CBM6 505 GATSGSQQILTNGD 518 33333333333333 PP == domain 3 score: 34.4 bits; conditional E-value: 1.1e-12 CBM35.hmm 28 glqaagdavtfnvdvpkaGsYelslrYang.tgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtvtLkaGkntitiksdw 109 ++a gd +++nvdv+k+GsY++++r ++ +g+ ++++ v+G ++ + ++++ w++++ tv L++G+++i++ BFR77563.1|CBM35|CBM6 754 AYTAIGDWLEYNVDVTKSGSYQVNYRVSTRnSGTRGEVEFQVDGVPQKRTILTTS-GWGDYRNISDTVALTQGSHKIRLYVTA 835 456778999*****************99987888899*********998888777.8********************998744 PP == domain 4 score: -2.8 bits; conditional E-value: 0.38 CBM35.hmm 63 tlsvvvnGtkvsevtfpstgnwdtwgtaagtvtLkaG 99 +++ vnG++ + + ++ + + t+ gtvtL aG BFR77563.1|CBM35|CBM6 894 SVTWDVNGASYDPTAVTGQ-T----FTVSGTVTLPAG 925 3444455555554444443.1....245667777766 PP == domain 5 score: 48.3 bits; conditional E-value: 5.5e-17 CBM35.hmm 9 tgvsvntnhagysGsgfvdglqaagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGtkvsevtfpstgnwdtwgtaagtv 94 +g++++ + +G++ v g++++gd + + v+v+k+ Y++ +r a +++t ++++ v+G +++ ++fpstg ++ w+t+ +v BFR77563.1|CBM35|CBM6 961 SGIKTEDS---TEGTKDV-GYTDPGDWMDYVVNVQKSALYKVDYRVAV-NSGTGVVNLLVDGVSNKITSFPSTGGFQVWKTVSDKV 1041 44544444...4566666.34489***********************9.7************************************ PP CBM35.hmm 95 tLkaGkntitiksdwGwinldslel 119 + +aGk+ti++ ++G nl+++el BFR77563.1|CBM35|CBM6 1042 YISAGKHTIRLAINTGGWNLNWFEL 1066 **********************986 PP == domain 6 score: -1.1 bits; conditional E-value: 0.11 CBM35.hmm 8 ltgvsvntnhagysGsgfvdglqaagdavtfnvdvpkaGsYelslrYangtgstktlsvvvnGt 71 t++svn + +G g+ +l +a+++++++v + ++ +l+ + a+ ++++ + v+G+ BFR77563.1|CBM35|CBM6 1576 NTTISVNH-VKIANGLGNELQLGGASSEIQITVPAIPVDKAQLNATIAS---AQAKYNAAVEGG 1635 23332222.3445677777777777777777777766777777777776...344455555554 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1744 residues searched) Target model(s): 2 (268 nodes) Passed MSV filter: 2 (1); expected 0.0 (0.02) Passed bias filter: 2 (1); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 256.32 // [ok]