# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/CBM32/fasta_for_each_cluster/cluster_46.txt # target HMM database: merged_hmms/CBM32.hmm # per-dom hits tabular output: hmmscan_out/domain_result/CBM32/CBM32_cluster_46.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: QRC52241.1|CBM32 [L=585] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.7e-17 48.1 2.2 7.7e-17 48.1 2.2 1.9 2 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.6 0.1 0.82 0.82 59 80 .. 250 270 .. 239 286 .. 0.55 2 ! 48.1 2.2 7.7e-17 7.7e-17 10 114 .. 355 468 .. 348 483 .. 0.75 Alignments for each domain: == domain 1 score: -3.6 bits; conditional E-value: 0.82 CBM32.hmm 59 grikdykvevStDgktWttvae 80 ++ +++k e +++ +++++ e QRC52241.1|CBM32 250 QNYYTIKSEFYKNN-NYKPITE 270 55666666666555.6666654 PP == domain 2 score: 48.1 bits; conditional E-value: 7.7e-17 CBM32.hmm 10 sssaaggggaenavDgdpnt..rWssa.g........qwltvdLgkp.ttvdkvvltwaengrikdykvevStDgktWttvaekgnttd.gtt 89 +ss++g++ + a+D +p++ Wss+ + +l++++++ ++v+k+++ + +++d+k+++S+D+++W+ ++e++n + ++ QRC52241.1|CBM32 355 ASSTEGNYYPYQAFDRNPSNayAWSSNrYdspeirqsANLYINFNTLtRKVSKYKILSYY-CYPYDIKLYGSNDNTDWKLLDERNNVVSeYK- 445 344456699*********98778***6424566776678******7659********523.67*******************9988665444. PP CBM32.hmm 90 e.titfdkpvtaryvRltvtkratna 114 +++f+++++ +y++++++++ + QRC52241.1|CBM32 446 WyDFKFKNTINYQYYKFNFKTN---E 468 54568889999********332...2 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (585 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 59.22 // Query: AWB31648.1|CBM32 [L=585] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.7e-17 48.1 2.2 7.7e-17 48.1 2.2 1.9 2 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.6 0.1 0.82 0.82 59 80 .. 250 270 .. 239 286 .. 0.55 2 ! 48.1 2.2 7.7e-17 7.7e-17 10 114 .. 355 468 .. 348 483 .. 0.75 Alignments for each domain: == domain 1 score: -3.6 bits; conditional E-value: 0.82 CBM32.hmm 59 grikdykvevStDgktWttvae 80 ++ +++k e +++ +++++ e AWB31648.1|CBM32 250 QNYYTIKSEFYKNN-NYKPITE 270 55666666666555.6666654 PP == domain 2 score: 48.1 bits; conditional E-value: 7.7e-17 CBM32.hmm 10 sssaaggggaenavDgdpnt..rWssa.g........qwltvdLgkp.ttvdkvvltwaengrikdykvevStDgktWttvaekgnttd.gtt 89 +ss++g++ + a+D +p++ Wss+ + +l++++++ ++v+k+++ + +++d+k+++S+D+++W+ ++e++n + ++ AWB31648.1|CBM32 355 ASSTEGNYYPYQAFDRNPSNayAWSSNrYdspeirqsANLYINFNTLtRKVSKYKILSYY-CYPYDIKLYGSNDNTDWKLLDERNNVVSeYK- 445 344456699*********98778***6424566776678******7659********523.67*******************9988665444. PP CBM32.hmm 90 e.titfdkpvtaryvRltvtkratna 114 +++f+++++ +y++++++++ + AWB31648.1|CBM32 446 WyDFKFKNTINYQYYKFNFKTN---E 468 54568889999********332...2 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (585 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 80.47 // Query: QGT44734.1|CBM32 [L=585] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.7e-17 48.1 2.2 7.7e-17 48.1 2.2 1.9 2 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.6 0.1 0.82 0.82 59 80 .. 250 270 .. 239 286 .. 0.55 2 ! 48.1 2.2 7.7e-17 7.7e-17 10 114 .. 355 468 .. 348 483 .. 0.75 Alignments for each domain: == domain 1 score: -3.6 bits; conditional E-value: 0.82 CBM32.hmm 59 grikdykvevStDgktWttvae 80 ++ +++k e +++ +++++ e QGT44734.1|CBM32 250 QNYYTIKSEFYKNN-NYKPITE 270 55666666666555.6666654 PP == domain 2 score: 48.1 bits; conditional E-value: 7.7e-17 CBM32.hmm 10 sssaaggggaenavDgdpnt..rWssa.g........qwltvdLgkp.ttvdkvvltwaengrikdykvevStDgktWttvaekgnttd.gtt 89 +ss++g++ + a+D +p++ Wss+ + +l++++++ ++v+k+++ + +++d+k+++S+D+++W+ ++e++n + ++ QGT44734.1|CBM32 355 ASSTEGNYYPYQAFDRNPSNayAWSSNrYdspeirqsANLYINFNTLtRKVSKYKILSYY-CYPYDIKLYGSNDNTDWKLLDERNNVVSeYK- 445 344456699*********98778***6424566776678******7659********523.67*******************9988665444. PP CBM32.hmm 90 e.titfdkpvtaryvRltvtkratna 114 +++f+++++ +y++++++++ + QGT44734.1|CBM32 446 WyDFKFKNTINYQYYKFNFKTN---E 468 54568889999********332...2 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (585 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 88.53 // Query: AWB18832.1|CBM32 [L=585] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.7e-17 48.1 2.2 7.7e-17 48.1 2.2 1.9 2 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.6 0.1 0.82 0.82 59 80 .. 250 270 .. 239 286 .. 0.55 2 ! 48.1 2.2 7.7e-17 7.7e-17 10 114 .. 355 468 .. 348 483 .. 0.75 Alignments for each domain: == domain 1 score: -3.6 bits; conditional E-value: 0.82 CBM32.hmm 59 grikdykvevStDgktWttvae 80 ++ +++k e +++ +++++ e AWB18832.1|CBM32 250 QNYYTIKSEFYKNN-NYKPITE 270 55666666666555.6666654 PP == domain 2 score: 48.1 bits; conditional E-value: 7.7e-17 CBM32.hmm 10 sssaaggggaenavDgdpnt..rWssa.g........qwltvdLgkp.ttvdkvvltwaengrikdykvevStDgktWttvaekgnttd.gtt 89 +ss++g++ + a+D +p++ Wss+ + +l++++++ ++v+k+++ + +++d+k+++S+D+++W+ ++e++n + ++ AWB18832.1|CBM32 355 ASSTEGNYYPYQAFDRNPSNayAWSSNrYdspeirqsANLYINFNTLtRKVSKYKILSYY-CYPYDIKLYGSNDNTDWKLLDERNNVVSeYK- 445 344456699*********98778***6424566776678******7659********523.67*******************9988665444. PP CBM32.hmm 90 e.titfdkpvtaryvRltvtkratna 114 +++f+++++ +y++++++++ + AWB18832.1|CBM32 446 WyDFKFKNTINYQYYKFNFKTN---E 468 54568889999********332...2 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (585 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 93.14 // [ok]