# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/CBM32/fasta_for_each_cluster/cluster_276.txt # target HMM database: merged_hmms/CBM32.hmm # per-dom hits tabular output: hmmscan_out/domain_result/CBM32/CBM32_cluster_276.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: UYU40308.1|CBM32|GH105 [L=669] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.5e-23 69.1 0.8 5.5e-23 68.0 0.8 1.5 1 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 68.0 0.8 5.5e-23 5.5e-23 7 121 .. 454 570 .. 449 573 .. 0.79 Alignments for each domain: == domain 1 score: 68.0 bits; conditional E-value: 5.5e-23 CBM32.hmm 7 aessssaaggggaenavDgdpntrWssag..qwltvdLgkpttvdkvvltw..aengrikdykvevStDgktWttvaekgnttdgtt 89 ++s +++++++++++++Dgd +trWss+g wl +dLg+++ +++v+l + ++ +r + +k++ S D+ +++v++ ++ +gtt UYU40308.1|CBM32|GH105 454 TASDYQNGTTNTPDKVTDGDMSTRWSSEGvgRWLLLDLGEERVLHSVRLAFyeGN-TRKNYFKISLSLDNVCFEDVYQGES--SGTT 537 456777888899***************86689******************97433.899*****************96543..2443 PP CBM32.hmm 90 e..ti.tfdkpvtaryvRltvtkratnawgasiaE 121 + ++ +f+ + +aryv+++++++++++w s+ E UYU40308.1|CBM32|GH105 538 DqlERyDFN-DKKARYVKIEFNGNSKSKW-NSVLE 570 324444777.5689*******77776567.55555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (669 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 69.41 // Query: UYU44899.1|CBM32|GH105 [L=669] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.5e-23 69.1 0.8 5.5e-23 68.0 0.8 1.5 1 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 68.0 0.8 5.5e-23 5.5e-23 7 121 .. 454 570 .. 449 573 .. 0.79 Alignments for each domain: == domain 1 score: 68.0 bits; conditional E-value: 5.5e-23 CBM32.hmm 7 aessssaaggggaenavDgdpntrWssag..qwltvdLgkpttvdkvvltw..aengrikdykvevStDgktWttvaekgnttdgtt 89 ++s +++++++++++++Dgd +trWss+g wl +dLg+++ +++v+l + ++ +r + +k++ S D+ +++v++ ++ +gtt UYU44899.1|CBM32|GH105 454 TASDYQNGTTNTPDKVTDGDMSTRWSSEGvgRWLLLDLGEERVLHSVRLAFyeGN-TRKNYFKISLSLDNVCFEDVYQGES--SGTT 537 456777888899***************86689******************97433.899*****************96543..2443 PP CBM32.hmm 90 e..ti.tfdkpvtaryvRltvtkratnawgasiaE 121 + ++ +f+ + +aryv+++++++++++w s+ E UYU44899.1|CBM32|GH105 538 DqlERyDFN-DKKARYVKIEFNGNSKSKW-NSVLE 570 324444777.5689*******77776567.55555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (669 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 106.11 // Query: UBD15052.1|CBM32|GH105 [L=676] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.5e-23 69.1 0.8 5.6e-23 68.0 0.8 1.5 1 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 68.0 0.8 5.6e-23 5.6e-23 7 121 .. 461 577 .. 456 580 .. 0.79 Alignments for each domain: == domain 1 score: 68.0 bits; conditional E-value: 5.6e-23 CBM32.hmm 7 aessssaaggggaenavDgdpntrWssag..qwltvdLgkpttvdkvvltw..aengrikdykvevStDgktWttvaekgnttdgtt 89 ++s +++++++++++++Dgd +trWss+g wl +dLg+++ +++v+l + ++ +r + +k++ S D+ +++v++ ++ +gtt UBD15052.1|CBM32|GH105 461 TASDYQNGTTNTPDKVTDGDMSTRWSSEGvgRWLLLDLGEERVLHSVRLAFyeGN-TRKNYFKISLSLDNVCFEDVYQGES--SGTT 544 456777888899***************86689******************97433.899*****************96543..2443 PP CBM32.hmm 90 e..ti.tfdkpvtaryvRltvtkratnawgasiaE 121 + ++ +f+ + +aryv+++++++++++w s+ E UBD15052.1|CBM32|GH105 545 DqlERyDFN-DKKARYVKIEFNGNSKSKW-NSVLE 577 324444777.5689*******77776567.55555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (676 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 100.56 // Query: XNS71334.1|CBM32|GH105 [L=676] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.1e-24 71.3 0.2 1.2e-23 70.1 0.2 1.6 1 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 70.1 0.2 1.2e-23 1.2e-23 10 122 .. 465 579 .. 458 581 .. 0.78 Alignments for each domain: == domain 1 score: 70.1 bits; conditional E-value: 1.2e-23 CBM32.hmm 10 sssaaggggaenavDgdpntrWssag..qwltvdLgkpttvdkvvltw..aengrikdykvevStDgktWttvaekgnttdgtte.. 90 ++++++++++++D d +trWss+g +wl +dLg+++ +++v++ + ++ +r + +++e S D+ +++tv++ ++ g+ + XNS71334.1|CBM32|GH105 465 DFQSGTTNTPDKVIDADMSTRWSSEGtgKWLLLDLGEERMLHSVRIAFyeGN-TRKNYFNIELSLDNINFETVYQGESS--GKSDql 548 445566689***************85589******************97433.899*****************965432..332212 PP CBM32.hmm 91 .titfdkpvtaryvRltvtkratnawgasiaEl 122 + +f+ +aryvRl+++++++++w si E+ XNS71334.1|CBM32|GH105 549 eNYDFS-VKKARYVRLEFNGNSKSKW-NSILEV 579 133555.4579*******88776678.888886 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (676 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 107.04 // Query: UBD64046.1|CBM32|GH105 [L=676] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.2e-23 68.7 0.7 7.1e-23 67.6 0.7 1.5 1 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 67.6 0.7 7.1e-23 7.1e-23 7 121 .. 461 577 .. 456 580 .. 0.79 Alignments for each domain: == domain 1 score: 67.6 bits; conditional E-value: 7.1e-23 CBM32.hmm 7 aessssaaggggaenavDgdpntrWssag..qwltvdLgkpttvdkvvltw..aengrikdykvevStDgktWttvaekgnttdgtt 89 ++s +++++++++++++Dgd +trWss+g wl +dLg+++ +++v+l + ++ +r + +k++ S D+ +++v++ ++ +gtt UBD64046.1|CBM32|GH105 461 TASDYQNGTTNTPDKVTDGDMSTRWSSEGvgRWLLLDLGEERVLHSVRLAFyeGN-TRKNYFKISLSLDNVCFEDVYQGES--SGTT 544 456777888899***************86689******************97433.899*****************96543..2443 PP CBM32.hmm 90 e..ti.tfdkpvtaryvRltvtkratnawgasiaE 121 + ++ +f+ + +aryv+++++++++++w s+ E UBD64046.1|CBM32|GH105 545 DqlERyDFN-DKKARYVKIEFSGNSKSKW-NSVLE 577 324444777.5689*******77665566.55555 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (676 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 109.05 // Query: XNS72443.1|CBM32|GH105 [L=595] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.6e-24 71.0 6.2 6.6e-24 71.0 6.2 2.1 2 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 71.0 6.2 6.6e-24 6.6e-24 7 121 .. 395 510 .. 389 513 .. 0.82 2 ? -1.1 0.1 0.13 0.13 61 106 .. 539 586 .. 518 590 .. 0.58 Alignments for each domain: == domain 1 score: 71.0 bits; conditional E-value: 6.6e-24 CBM32.hmm 7 aessssaaggggaenavDgdpntrWssag.qwltvdLgkpttvdkvvltw..aengrikdykvevStDgktWttvaekgnttd.gtt 89 ++s++++++++++e+++D d ntrWs++g qw+ +dL ++ t+ +v + + + r ++++e StD+++Wt+v + ++ +t XNS72443.1|CBM32|GH105 395 TASTYETGTTNTPEKTLDRDFNTRWSAEGeQWIKYDLLSEETIATVDIAFwdGH-KRKFNFSIELSTDDENWTEVFNGQS--GgNT- 477 45677888999****************988*******************87423.7899****************86543..2244. PP CBM32.hmm 90 eti.tfd.kpvtaryvRltvtkratnawgasiaE 121 ++ tf p +aryvR+ ++++++n+w si E XNS72443.1|CBM32|GH105 478 DRWeTFYiGPCKARYVRISGKGNTKNKW-NSILE 510 544477777999********77667778.78877 PP == domain 2 score: -1.1 bits; conditional E-value: 0.13 CBM32.hmm 61 ikdykvevStDgkt...Wttv.aekg.nttdgtte.ti.tfdkpvtaryvRlt 106 ++e+ +Dg+t ++++ +++ ++ + + +i +f++ +v+++ XNS72443.1|CBM32|GH105 539 SDVLNIEGTDDGETiciYNDLgVKVMeTW--NR-TiDIsSFSTG--IYFVKVQ 586 45568999999998777888844433233..33.2255566633..3777776 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (595 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 89.99 // Query: UYU47573.1|CBM32|GH105 [L=588] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.4e-24 71.0 6.2 6.4e-24 71.0 6.2 1.8 2 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 71.0 6.2 6.4e-24 6.4e-24 7 121 .. 388 503 .. 382 506 .. 0.82 2 ? -3.0 0.1 0.5 0.5 63 106 .. 534 579 .. 512 581 .. 0.52 Alignments for each domain: == domain 1 score: 71.0 bits; conditional E-value: 6.4e-24 CBM32.hmm 7 aessssaaggggaenavDgdpntrWssag.qwltvdLgkpttvdkvvltw..aengrikdykvevStDgktWttvaekgnttd.gtt 89 ++s++++++++++e+++D d ntrWs++g qw+ +dL ++ t+ +v + + + r ++++e StD+++Wt+v + ++ +t UYU47573.1|CBM32|GH105 388 TASTYETGTTNTPEKTLDRDFNTRWSAEGeQWIKYDLLSEETIATVDIAFwdGH-KRKFNFSIELSTDDENWTEVFNGQS--GgNT- 470 45677888999****************988*******************87423.7899****************86543..2244. PP CBM32.hmm 90 eti.tfd.kpvtaryvRltvtkratnawgasiaE 121 ++ tf p +aryvR+ ++++++n+w si E UYU47573.1|CBM32|GH105 471 DRWeTFYiGPCKARYVRISGKGNTKNKW-NSILE 503 544477777999********77667778.78877 PP == domain 2 score: -3.0 bits; conditional E-value: 0.5 CBM32.hmm 63 dykvevStDgkt...Wttv.aekg.nttdgtte.ti.tfdkpvtaryvRlt 106 ++e+ ++g+t ++++ +++ ++ + + +i +f++ +v+++ UYU47573.1|CBM32|GH105 534 VLNIEGTDNGETiciYNDLgVKVMeTW--NR-TiDIsSFSTG--IYFVKVQ 579 456788888877666666633332132..22.1244455532..3666665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (588 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 99.58 // Query: ULL18845.1|CBM32|PL35 [L=1407] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.3e-28 85.4 2.7 7.5e-28 83.7 2.7 1.9 1 CBM32.hmm Domain annotation for each model (and alignments): >> CBM32.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 83.7 2.7 7.5e-28 7.5e-28 10 122 .. 1151 1264 .. 1146 1266 .. 0.79 Alignments for each domain: == domain 1 score: 83.7 bits; conditional E-value: 7.5e-28 CBM32.hmm 10 sssaaggggaenavDgdpntrWssag.qwltvdLgkpttvdkvvltw.aen.grikdykvevStDgktWttv.aekgnttd.gtte 90 +ssa++g++a+na+Dgd +trWs+++ w+++dLg+ ++v++v + + + + +r++++++ vS+Dg+tW++v +g+ t+ + e ULL18845.1|CBM32|PL35 1151 ASSAQEGNPAANAIDGDMSTRWSADNtPWIQLDLGSSKQVNGVGIAFyN-GaTRTSKFDIAVSQDGQTWEKVlIGTGSGTTsN-ME 1234 23445669****************8778******************863.3489******************55455433212.35 PP CBM32.hmm 91 titfd.kpvtaryvRltvtkratnawgasiaEl 122 ++ f+ k +aryvR+t+ +++ n w s +E+ ULL18845.1|CBM32|PL35 1235 YFGFAeK--PARYVRVTGYGNSVNGW-NSYNEM 1264 8899944..58*******88777677.667776 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1407 residues searched) Target model(s): 1 (124 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 170.06 // [ok]