# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/CBM23/fasta_for_each_cluster/cluster_7.txt # target HMM database: merged_hmms/CBM23.hmm # per-dom hits tabular output: hmmscan_out/domain_result/CBM23/CBM23_cluster_7.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: QJC50841.1|CBM23|CBM61|GH5_41 [L=1754] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.1e-72 229.1 0.0 2.3e-37 115.2 0.0 2.5 2 CBM23.hmm Domain annotation for each model (and alignments): >> CBM23.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 115.2 0.0 2.3e-37 2.3e-37 8 161 .. 813 971 .. 806 972 .. 0.95 2 ! 111.4 0.0 3.2e-36 3.2e-36 2 160 .. 977 1140 .. 976 1141 .. 0.95 Alignments for each domain: == domain 1 score: 115.2 bits; conditional E-value: 2.3e-37 CBM23.hmm 8 Ytgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkpdgsnnklv 86 g d+ + + y + +g+ +++sld + +Gs+++++ Y+l+++gyaG ++ l+gaD g+++l w+kpdgs+nkl QJC50841.1|CBM23|CBM61|GH5_41 813 DFGRDDSIAARYERDGNGDgISISLDGQVRFKGSYGVRLGYELGSAGYAGLSRPLGGADLDGFDALHAWVKPDGSGNKLS 892 45789999************************************************************************ PP CBM23.hmm 87 lqikeadGedfeveltldgteakevtipfskfaeaswes..kgngtldlksvkeivlyvns..ngsagsgklviddikl 161 +q++ dG +e+ ++l+gt a+ v+i + +f++++w++ +g gt+dl+sv++++l v + a sg++v+dd+kl QJC50841.1|CBM23|CBM61|GH5_41 893 FQLTAGDGRVWEAPVALSGTAARVVEIKLADFVQPQWNKdtAGEGTMDLSSVQRFALIVSGseSVAASSGSIVVDDVKL 971 ****9**********************************99****************999987788999*********8 PP == domain 2 score: 111.4 bits; conditional E-value: 3.2e-36 CBM23.hmm 2 iddFesYtgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkp 78 d+Fe+Y g +a++q+a+ +n +g+ +sld++ kseG ++l+++Yd++ +gyaG + + ++ sgy+++s+wl+p QJC50841.1|CBM23|CBM61|GH5_41 977 LDSFEGYGGYNALVQKAFARNAGGGlLDVSLDASRKSEGGYGLRMDYDFSGPGYAGGSFTPDYLRLSGYDGFSFWLQP 1054 59*********************************************************999999************* PP CBM23.hmm 79 dgsnnklvlqikeadGedfeveltldgteakevtipfskfaeaswes..kgngtldlksvkeivlyvns..ngsagsg 152 dg +n+l++q+++ dG+ +e+++ + g++ ++v++pf+ f+++ w+ + ++ + ++ ++ly + ++ + +g QJC50841.1|CBM23|CBM61|GH5_41 1055 DGAGNELAIQFSDEDGKFWETKMVMRGSDSRLVQVPFEAFRHPGWYGgsPDARPDSSRLIQTFSLYLGGtpDSRSSAG 1132 ***********************************************8444444555679********99999***** PP CBM23.hmm 153 klviddik 160 +++iddi+ QJC50841.1|CBM23|CBM61|GH5_41 1133 TIYIDDIQ 1140 ******96 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1754 residues searched) Target model(s): 1 (162 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 137.30 // Query: QHW31794.1|CBM23|CBM61|GH5 [L=1968] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.2e-79 249.9 6.6 3.3e-41 127.6 0.6 4.0 4 CBM23.hmm Domain annotation for each model (and alignments): >> CBM23.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 127.6 0.6 3.3e-41 3.3e-41 4 161 .. 797 960 .. 794 961 .. 0.97 2 ! 122.3 0.1 1.5e-39 1.5e-39 2 159 .. 966 1128 .. 965 1130 .. 0.95 3 ? -2.4 0.1 0.32 0.32 46 98 .. 1444 1498 .. 1418 1520 .. 0.60 4 ? 0.1 0.0 0.056 0.056 95 142 .. 1622 1672 .. 1615 1690 .. 0.65 Alignments for each domain: == domain 1 score: 127.6 bits; conditional E-value: 3.3e-41 CBM23.hmm 4 dFesYtgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkpdgsnnkl 85 d e+ +g+da++q+ y +n +g+ +++ ld+++k+ Gs++++++Y+l+++ yaG t++l+g + s++++l w+kpdgs+nkl QHW31794.1|CBM23|CBM61|GH5 797 DGEYDYGSDANVQARYERNVNGDdISIALDTANKNRGSYGVRVNYSLGSAYYAGLTQELGGVNLSAFDALHAWIKPDGSGNKL 879 5566679**************************************************************************** PP CBM23.hmm 86 vlqikeadGedfeveltldgteakevtipfskfaeaswes...kgngtldlksvkeivlyvns..ngsagsgklviddikl 161 ++q+++ dG +e ++ ++gt +v++ + +f++++w++ ++ dl+sv+++ +yv+ n sa sg++++dd+kl QHW31794.1|CBM23|CBM61|GH5 880 TFQLQTGDGRVWESTTPMTGTAGGTVELKLADFVQPQWNQdaaGAAEAIDLSSVSSFGIYVGGgdNASAASGAVYLDDVKL 960 ****************************************998889999*************999***************8 PP == domain 2 score: 122.3 bits; conditional E-value: 1.5e-39 CBM23.hmm 2 iddFesYtgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkpdgs 81 d+Fe+Y g +a+l++a+s+n++g+ lsldk++kseGs++l+++Y+++ +gyaG + + + + gy+++s+wl+pdgs QHW31794.1|CBM23|CBM61|GH5 966 LDSFEGYGGYNALLNKAFSRNTGGGsFDLSLDKTHKSEGSYGLRVDYNFGGPGYAGGSFNPDFLNLKGYDGFSFWLQPDGS 1046 59***********************9**********************************999****************** PP CBM23.hmm 82 nnklvlqikeadGedfeveltldgteakevtipfskfaeaswes.kgngtldl.ksvkeivlyvns..ngsagsgklvidd 158 nn+l++q+++a+G+ +e+++ + gt+++++ +pf++f+ +sw+s + d+ ++++ ++ly++ ++ ++sg+l++dd QHW31794.1|CBM23|CBM61|GH5 1047 NNELAIQFTDASGKFWETKTVIRGTDPRLMYVPFDSFRYPSWYSgDTTARPDPkQNITAFSLYMGGgdSSLSTSGTLYFDD 1127 ********************************************744555555379*********9988899********* PP CBM23.hmm 159 i 159 i QHW31794.1|CBM23|CBM61|GH5 1128 I 1128 9 PP == domain 3 score: -2.4 bits; conditional E-value: 0.32 CBM23.hmm 46 kYdlkt..egyaGvtkklsgaDws.gynklslwlkpdgsnnklvlqikeadGedfe 98 Y+l + ++ + vt ++ ++ + g +ls w k+ g ++ + ++ + ++ + QHW31794.1|CBM23|CBM61|GH5 1444 SYKLVHwnGSPYEVTSSTVVTNLPdGVYELSAWTKSKGGQEAAEMTAA-VGADKHA 1498 566666323334455554447887788899999999998888777776.4444444 PP == domain 4 score: 0.1 bits; conditional E-value: 0.056 CBM23.hmm 95 edfevelt.ldgteakevtipfskfae...asweskgngtldlksvkeivly 142 + +++lt +g++a +v +p+++f+ a+w + ++ + + s+++ +l QHW31794.1|CBM23|CBM61|GH5 1622 RTLAIHLTgAEGAKAVQVDLPLQQFEAnpeAEWIT-VDTGFAAVSIHRGALK 1672 5555666667899999*********9966666666.6666666666666554 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1968 residues searched) Target model(s): 1 (162 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 146.56 // Query: QGG54903.1|CBM23|CBM61|GH5_41 [L=1683] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.8e-74 234.1 0.0 1.2e-38 119.3 0.0 2.6 2 CBM23.hmm Domain annotation for each model (and alignments): >> CBM23.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 119.3 0.0 1.2e-38 1.2e-38 8 161 .. 816 974 .. 809 975 .. 0.96 2 ! 112.3 0.0 1.8e-36 1.8e-36 2 160 .. 980 1143 .. 979 1144 .. 0.96 Alignments for each domain: == domain 1 score: 119.3 bits; conditional E-value: 1.2e-38 CBM23.hmm 8 Ytgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkpdgsnnklv 86 g d+ + + y +n++g+ +++ ld e+ +Gs+++++ Y+l+++gyaG ++ l+gaD sg+++l w+kpdgs+nkl QGG54903.1|CBM23|CBM61|GH5_41 816 DFGRDDSIAARYERNENGDgISIALDGESRFKGSYGVRLGYELGSAGYAGLSRPLGGADLSGFDALHAWVKPDGSGNKLS 895 4578999************************************************************************* PP CBM23.hmm 87 lqikeadGedfeveltldgteakevtipfskfaeaswes..kgngtldlksvkeivlyvns..ngsagsgklviddikl 161 +q++ dG +e+ ++l+gt a+ v+i + +f++++w++ +g g++dl+sv++++l v + sa sg+++id++kl QGG54903.1|CBM23|CBM61|GH5_41 896 FQLTAGDGRVWEAPVALSGTAARVVEIKLADFVQPEWSKdaAGEGAMDLSSVQRFALIVSGgeSASASSGSIAIDEVKL 974 ****9**********************************99****************999999999***********98 PP == domain 2 score: 112.3 bits; conditional E-value: 1.8e-36 CBM23.hmm 2 iddFesYtgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkp 78 d+Fe+Y g +a++q+a+ +n +g+ +sld++ kseG ++l+++Yd++ +gyaG + + ++ sgy+++s+wl+p QGG54903.1|CBM23|CBM61|GH5_41 980 LDNFEGYGGYNALVQKAFARNAGGGlLDVSLDASRKSEGGYGLRMDYDFSGPGYAGGSFSPDYLRLSGYDGFSFWLQP 1057 59**************************************************************************** PP CBM23.hmm 79 dgsnnklvlqikeadGedfeveltldgteakevtipfskfaeaswes..kgngtldlksvkeivlyvns..ngsagsg 152 dg +n+l++q+++ dG+ +e+++ + g+++++v++pf+ f+++ w+ ++ ++ + +k ++ly + ++ + +g QGG54903.1|CBM23|CBM61|GH5_41 1058 DGAGNELAIQFSDEDGKFWETKMIMRGSDPRLVQVPFDAFRHPGWYGgsADARPDSSRLIKTFSLYLGGspDSRSSAG 1135 ***********************************************8555566667789********999999**** PP CBM23.hmm 153 klviddik 160 +++iddi+ QGG54903.1|CBM23|CBM61|GH5_41 1136 TIYIDDIQ 1143 ******96 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1683 residues searched) Target model(s): 1 (162 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 164.89 // Query: AYQ73430.1|CBM23|CBM61|GH5 [L=1306] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.1e-81 259.2 1.3 3.4e-42 130.8 0.4 2.8 2 CBM23.hmm Domain annotation for each model (and alignments): >> CBM23.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 126.3 0.0 8.2e-41 8.2e-41 3 160 .. 781 941 .. 779 943 .. 0.97 2 ! 130.8 0.4 3.4e-42 3.4e-42 2 160 .. 948 1112 .. 947 1114 .. 0.95 Alignments for each domain: == domain 1 score: 126.3 bits; conditional E-value: 8.2e-41 CBM23.hmm 3 ddFesYtgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkpdgsnnk 84 ++ e+Y gd+ ++++ay++ +g+ +++s+d ++k Gs++++++Y+l+++gyaG t++l+gaD s++++l w+kpdgs+n+ AYQ73430.1|CBM23|CBM61|GH5 781 ENGEYYFGDNGLIREAYTRDGNGGaISISVDPANKLHGSYGVSLDYSLSQAGYAGLTRNLGGADLSAFDALHAWVKPDGSGNT 863 7789******************************************************************************* PP CBM23.hmm 85 lvlqikeadGedfeveltldgteakevtipfskfaeasweskgngtldlksvkeivlyvns..ngsagsgklviddik 160 l++ + +ad+ +e+ ++l+gte ++++ipfs f+++ +++ +++d+k+vk ++ yv s s+ +gk+ +dd+ AYQ73430.1|CBM23|CBM61|GH5 864 LTFRFRTADDRVWETGVKLTGTEGRTIEIPFSAFKQPASDTQAATAMDMKAVKAFSYYVRSaeGASTAAGKIGLDDVN 941 *************************************************************97778999*******96 PP == domain 2 score: 130.8 bits; conditional E-value: 3.4e-42 CBM23.hmm 2 iddFesYtgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkpdgs 81 id+FesY g da+l+ ay +n +g+ + ld ++kseG+++lk++Yd++++gyaG t k + + g++++++w kpdgs AYQ73430.1|CBM23|CBM61|GH5 948 IDNFESYGGYDALLKMAYGRNAGGGtFDMALDRTNKSEGQYGLKLTYDITSAGYAGATLKPDFLNLKGFDGFTMWFKPDGS 1028 9************************99*********************************999****************** PP CBM23.hmm 82 nnklvlqikeadGedfeveltldgteakevtipfskfaeaswes.kgngtldl.ksvkeivlyvns...ngsagsgklvid 157 +nklv+q+++ dG+ +e++ + gt+ak++ +pfs f++++w+ +n t dl k+++ +++y+ns ++++++++id AYQ73430.1|CBM23|CBM61|GH5 1029 GNKLVIQFTTEDGQFWETSGLIRGTDAKLLYVPFSAFRHPEWYGgDRNATPDLtKNITGFSIYINSnpdTTKKTASTVYID 1109 ********************************************977777775389**********8877888999***** PP CBM23.hmm 158 dik 160 di AYQ73430.1|CBM23|CBM61|GH5 1110 DIN 1112 *96 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1306 residues searched) Target model(s): 1 (162 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 114.98 // Query: ASS68430.2|CBM23|CBM61|GH5_41 [L=1737] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.1e-62 197.5 0.0 1.1e-33 103.1 0.0 2.6 2 CBM23.hmm Domain annotation for each model (and alignments): >> CBM23.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 91.6 0.0 3.9e-30 3.9e-30 3 161 .. 813 973 .. 811 974 .. 0.94 2 ! 103.1 0.0 1.1e-33 1.1e-33 2 160 .. 979 1142 .. 978 1143 .. 0.95 Alignments for each domain: == domain 1 score: 91.6 bits; conditional E-value: 3.9e-30 CBM23.hmm 3 ddFesYtgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkpdgs 81 +d e+ +g d+ + + y + ++g+ ++ ld++ k+ Gs++ k+ Y+l+++++aG ++ ++ aD s +++l w+kpdgs ASS68430.2|CBM23|CBM61|GH5_41 813 EDGEYDYGKDDSIAARYERDQDGGeASIALDAAAKNRGSYGAKLRYELGSASFAGLSRPIGHADLSSFDALHAWVKPDGS 892 566776789*********************************************************************** PP CBM23.hmm 82 nnklvlqikeadGedfeveltldgteakevtipfskfaeasweskgngtldlksvkeivlyvns..ngsagsgklviddi 159 +n+l + + + dG +e+ tl gt a+++++ + +f+ a + g g dl++v+ + lyv++ s +g++v+dd+ ASS68430.2|CBM23|CBM61|GH5_41 893 GNRLGFRLFTGDGRIWEAAATLGGTAARTLEVKLADFTLAAGDV-GRGPIDLSDVTGFGLYVGKtdGASPAAGTIVVDDV 971 ***************************************66665.9******************96667789******** PP CBM23.hmm 160 kl 161 ++ ASS68430.2|CBM23|CBM61|GH5_41 972 RM 973 96 PP == domain 2 score: 103.1 bits; conditional E-value: 1.1e-33 CBM23.hmm 2 iddFesYtgddaalqsaysenssgn.stlsldkeekseGskalkfkYdlktegyaGvtkklsgaDwsgynklslwlkp 78 d+Fe+Y g +a++q+a+ +n++g+ +sld + kseG+++l+++Yd++ +gyaG + + ++ gy+++s+wl+p ASS68430.2|CBM23|CBM61|GH5_41 979 LDNFEGYGGYNALVQKAFARNTGGGaLDVSLDGSRKSEGDYGLRMDYDFSGPGYAGGSFSPDYLKLDGYDGFSFWLQP 1056 59**********************************************************999999************ PP CBM23.hmm 79 dgsnnklvlqikeadGedfeveltldgteakevtipfskfaeaswes..kgngtldlksvkeivlyvns..ngsagsg 152 dgsnn+l++q+++ G+ +e++ g++++++ +pfs f+ +sw+ g+ + +++k ++ly + ++ + sg ASS68430.2|CBM23|CBM61|GH5_41 1057 DGSNNELAIQFSDDAGKFWETKAVFRGSDPRLMYVPFSAFRYPSWYGgdPGDRPDPSRQIKTFSLYLGGspDSLSSSG 1134 ***********************************************844555555678*********9999999*** PP CBM23.hmm 153 klviddik 160 +l++ddi+ ASS68430.2|CBM23|CBM61|GH5_41 1135 TLYVDDIQ 1142 ******96 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1737 residues searched) Target model(s): 1 (162 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 136.36 // [ok]