# hmmscan :: search sequence(s) against a profile database # HMMER 3.3.2 (Nov 2020); http://hmmer.org/ # Copyright (C) 2020 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query sequence file: /array2/siva/dbcansub_update/cazy2025/match_results/dbsub_data_2025/merged_clusters/CBM13/fasta_for_each_cluster/cluster_68.txt # target HMM database: merged_hmms/CBM13.hmm # per-dom hits tabular output: hmmscan_out/domain_result/CBM13/CBM13_cluster_68.out.dm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: BAJ28808.1|CBM13 [L=1448] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.9e-31 96.0 9.6 1.9e-31 96.0 9.6 3.5 4 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.6 0.2 0.65 0.65 71 87 .. 573 588 .. 554 600 .. 0.52 2 ? -3.9 0.1 0.77 0.77 58 79 .. 691 708 .. 665 715 .. 0.53 3 ? 2.3 0.2 0.01 0.01 23 134 .. 1149 1213 .. 1127 1243 .. 0.50 4 ! 96.0 9.6 1.9e-31 1.9e-31 11 132 .. 1325 1443 .. 1320 1447 .. 0.88 Alignments for each domain: == domain 1 score: -3.6 bits; conditional E-value: 0.65 CBM13.hmm 71 aev..qqytcngganQqWr 87 ++v +++++ +n +W BAJ28808.1|CBM13 573 TTVnfHIWDD---NNSTWH 588 3331133333...333343 PP == domain 2 score: -3.9 bits; conditional E-value: 0.77 CBM13.hmm 58 kcLdvaasstaagaevqqytcn 79 c+ + s ++ ++v+ ++c+ BAJ28808.1|CBM13 691 ACVRW---S-TDPTAVTGWSCD 708 34444...1.244445555552 PP == domain 3 score: 2.3 bits; conditional E-value: 0.01 CBM13.hmm 23 aagan.vqlwdccnganQqWtltsdg....tirlenhq.sgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyykirnrasgkcL 107 aaga+ v+ + + + Qq ++++ + ++ + sg +L+ a+ + +++++ +g+ Wr+ BAJ28808.1|CBM13 1149 AAGATsVISYG-VG-QTQQVKVDTSKsftvSVWAKPTGvSGSVLSTK---GATSSGFILWPDKDGT---WRF------------------- 1212 55554466555.22.44666666555443322222222334455532...2233345555554443...444................... PP CBM13.hmm 108 dvkggadgtpvqqwdcngganQqWsvl 134 BAJ28808.1|CBM13 1213 --------------------------G 1213 ..........................3 PP == domain 4 score: 96.0 bits; conditional E-value: 1.9e-31 CBM13.hmm 11 nvnsgkcl..ggst...aaganvqlwdccn.ganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgy 95 +v+s+kcl + + a+g+++qlwdc n +++Qq t +++gti++ ++ c+dv++ t++g+++q+++c+g+++QqW + + BAJ28808.1|CBM13 1325 GVGSNKCLdaN--GgvdANGTAIQLWDC-NpSTAQQATAQPNGTIKVLSR----CVDVTGAVTGNGTKIQLWNCDGNPAQQWLYRAD---- 1404 678*****652..444699999*****5.64788*********9997776....****977889**********999*******877.... PP CBM13.hmm 96 ykirnrasgkcLdvkgg..adgtpvqqwdcngganQqWs 132 + + n +sg+cLd+ +g ++gt++q+wdcn+++ Q+W BAJ28808.1|CBM13 1405 GSLYNPMSGRCLDIPNGtlTNGTQLQIWDCNQTYPQRWG 1443 67*************889********************5 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1448 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 131.99 // Query: ARF81327.1|CBM13 [L=1263] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.7e-19 55.5 9.3 4.7e-19 55.5 9.3 2.9 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.3 0.1 0.061 0.061 102 130 .. 723 750 .. 700 815 .. 0.67 2 ! 55.5 9.3 4.7e-19 4.7e-19 14 136 .. 1133 1260 .. 1122 1262 .. 0.82 Alignments for each domain: == domain 1 score: -0.3 bits; conditional E-value: 0.061 CBM13.hmm 102 asg.kcLdvkggadgtpvqqwdcngganQq 130 asg c+ v+ +d tpv+ w+c ++ Q ARF81327.1|CBM13 723 ASGvACVRVS--TDPTPVVGWKCGQDGTQA 750 4544666666..578999999997766565 PP == domain 2 score: 55.5 bits; conditional E-value: 4.7e-19 CBM13.hmm 14 sgkcl..ggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyykirn.. 100 s +c+ g +ga++ + +c+n+ +Q+++l++dgtir + c++ ++++++g+++ + +c+g + Q+W ++ + ++i+n ARF81327.1|CBM13 1133 SWQCMdaWGGSRDGAPLAIGSCWNTVSQRFNLSTDGTIRAGSY----CVSTVGNANTNGTQLALANCDGRPTQKWSVQAD----GRIINqt 1215 6789974333388999*****999666*********9885554....***6677778**********999*******999....5677777 PP CBM13.hmm 101 ......rasgkcLdvkgg..adgtpvqqwdcng.ganQqWsvlks 136 ++g+c++++++ ++gt++ +wdc g +n +W+++++ ARF81327.1|CBM13 1216 titggdPNTGRCIELNNShtEQGTRLDIWDCPGlFDNSRWTLQAE 1260 777785677*******889777******************88765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1263 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 66.60 // Query: QER97487.1|CBM13 [L=1436] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.2e-28 85.4 0.8 1e-27 83.8 0.8 1.9 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 83.8 0.8 1e-27 1e-27 11 129 .. 1317 1428 .. 1309 1431 .. 0.83 Alignments for each domain: == domain 1 score: 83.8 bits; conditional E-value: 1e-27 CBM13.hmm 11 nvnsgkcl...ggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdva.asstaagaevqqytcngganQqWrlesvgsgyyk 97 +++sg cl gg +++g +vq+++c+++ +Q W+ +dg+++++ h c d+ + s ++g+++q+++cng+anQ+W + + + QER97487.1|CBM13 1317 DQASGSCLdlsGGVAEQGRPVQMYACNGTPAQMWKGMPDGSLQIKGH----CFDAPgNTSLGNGTPLQIWPCNGSANQKWLFRAD----GS 1399 456*****764444478878*****776677*********8888777....***87555555********************877....56 PP CBM13.hmm 98 irnrasgkcLdvkggadgtpvqqwdcngganQ 129 + n asg+cLd+ g g+++ +wdcn++ Q QER97487.1|CBM13 1400 VYNPASGRCLDAPG---GNTLYLWDCNQTRPQ 1428 99***********6...899*******96656 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1436 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 188.87 // Query: BAJ29602.1|CBM13 [L=1423] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.4e-32 99.7 7.8 1.4e-32 99.7 7.8 3.1 3 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.8 0.1 0.37 0.37 40 79 .. 663 700 .. 646 708 .. 0.60 2 ? 0.1 0.5 0.048 0.048 105 156 .. 1163 1210 .. 1105 1230 .. 0.64 3 ! 99.7 7.8 1.4e-32 1.4e-32 11 132 .. 1300 1418 .. 1297 1423 .] 0.89 Alignments for each domain: == domain 1 score: -2.8 bits; conditional E-value: 0.37 CBM13.hmm 40 qWtltsdgtirlenhq.sg.kcLdvaasstaagaevqqytcn 79 ++tlt+d+ + sg c+ + s ++ ++v+ ++c+ BAJ29602.1|CBM13 663 TFTLTADDPAPASGLNaSGvACVRW---S-TDPTAVTGWSCD 700 5666666644444444454357777...2.466677777774 PP == domain 2 score: 0.1 bits; conditional E-value: 0.048 CBM13.hmm 105 kcLdvkgg.adgtpvqqwdcngganQqWsvlksdlkikliaekvipdgnnnil 156 +L kg+ ++g +++w++ +g+ W + +++++++ +++ ++d + + BAJ29602.1|CBM13 1163 PVLSTKGAtSSG--FILWPDKDGT---WHFGLATTDNANWNYHQTSDTSTSAA 1210 567777655556..8888876655...66666666666666666666555544 PP == domain 3 score: 99.7 bits; conditional E-value: 1.4e-32 CBM13.hmm 11 nvnsgkcl...ggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyyki 98 +v+++kcl ++ +a+g+++qlwdc+n+a+Qq t +++g++++ +cLdv++ +ta+g+++q+++cn++a+Q+W + + + BAJ29602.1|CBM13 1300 SVGTNKCLdprDAVDANGTAIQLWDCNNTAAQQATAQPNGAVKVLT----RCLDVTNAATANGTPIQLWDCNNTAAQKWIPRAD----GSL 1382 6789****88777779999******888777*********777544....4****99999*******************99766....56* PP CBM13.hmm 99 rnrasgkcLdvkgg..adgtpvqqwdcngganQqWs 132 n sg+cLd+ gg ++gt++q+wdcn+g+ Q+W BAJ29602.1|CBM13 1383 FNPLSGRCLDLPGGtsDNGTRLQIWDCNQGYAQRWG 1418 ************999666*****************6 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1423 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 142.55 // Query: ARF78097.1|CBM13 [L=1184] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1e-22 67.5 3.9 1e-22 67.5 3.9 2.8 3 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.0 0.1 0.05 0.05 102 131 .. 645 692 .. 622 741 .. 0.65 2 ? -3.8 0.3 0.74 0.74 51 88 .. 970 1009 .. 930 1022 .. 0.49 3 ! 67.5 3.9 1e-22 1e-22 14 134 .. 1054 1179 .. 1042 1183 .. 0.82 Alignments for each domain: == domain 1 score: 0.0 bits; conditional E-value: 0.05 CBM13.hmm 102 asg.kcLdvkggadgtpvqqwdcngganQq...................W 131 asg c+ v+ +d tpv+ w+c ++ Q W ARF78097.1|CBM13 645 ASGvACVRVS--TDPTPVVGWKCGQDGTQApgtpytyqprrwgtnalyaW 692 4544666666..57899999999776666555555555555444444444 PP == domain 2 score: -3.8 bits; conditional E-value: 0.74 CBM13.hmm 51 lenhqs.gkcLdvaasstaagaevqqyt.cngganQqWrl 88 l+ ++ +L+ a+ +taa+ ++ + + +n+g W + ARF78097.1|CBM13 970 LTKPDTgTAILTGANWTTAAQPKIGAADlNNDGYPDLWAI 1009 3333321345555555555555555555333333345555 PP == domain 3 score: 67.5 bits; conditional E-value: 1e-22 CBM13.hmm 14 sgkclggst..aaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyykirn.. 100 s +c+++++ +ga++ +++c+n++nQ+++l++dgtir cL+ a+ ++++g+++++ +c+g + Q+W + ++g +i+n ARF78097.1|CBM13 1054 SWQCIDAEGgpRDGAPLAIYSCWNTRNQRFNLSTDGTIRAGA----YCLSTAGDANTNGTQLTLTNCDGRPTQKWSVRPDG----RIINqt 1136 7789955555699999*****999999*********888444....3***8877778**********999*******9995....555555 PP CBM13.hmm 101 ......rasgkcLdvkgg..adgtpvqqwdcng.ganQqWsvl 134 ++g+c++++++ ++gt++ +wdc g +n +W+++ ARF78097.1|CBM13 1137 titgadPNTGRCIELNNShtEQGTRLDIWDCPGlFDNSRWTLQ 1179 555554466*******889777******************875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1184 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 123.02 // Query: AUG80461.1|CBM13 [L=1435] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.9e-24 73.1 4.7 1.9e-24 73.1 4.7 3.2 4 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.5 1.5 0.61 0.61 82 110 .. 451 467 .. 400 506 .. 0.56 2 ? -4.3 0.1 1 1 68 125 .. 690 702 .. 680 705 .. 0.49 3 ? -1.6 0.6 0.16 0.16 15 139 .. 1170 1204 .. 1135 1235 .. 0.58 4 ! 73.1 4.7 1.9e-24 1.9e-24 10 135 .. 1309 1432 .. 1301 1435 .] 0.79 Alignments for each domain: == domain 1 score: -3.5 bits; conditional E-value: 0.61 CBM13.hmm 82 anQqWrlesvgsgyykirnrasgkcLdvk 110 + ++y+i+n g dv+ AUG80461.1|CBM13 451 G-----------NTYWITN-TGGISYDVS 467 2...........2445555.334444554 PP == domain 2 score: -4.3 bits; conditional E-value: 1 CBM13.hmm 68 aagaevqqytcngganQqWrlesvgsgyykirnrasgkcLdvkggadgtpvqqwdcng 125 ++ tpv+ w+cn AUG80461.1|CBM13 690 DNP---------------------------------------------TPVTGWKCNA 702 233.............................................4444444443 PP == domain 3 score: -1.6 bits; conditional E-value: 0.16 CBM13.hmm 15 gkclggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyykirnrasgk 105 g +lg+++++++n +w+ AUG80461.1|CBM13 1170 GVVLGQDGTTTSNFMIWP------------------------------------------------------------------------- 1187 333333333333444455......................................................................... PP CBM13.hmm 106 cLdvkggadgtpvqqwdcngganQqWsvlksdlk 139 + g+ +W++ ++++ AUG80461.1|CBM13 1188 -----------------SHAGNGVNWRFAMATAD 1204 .................44444444444444433 PP == domain 4 score: 73.1 bits; conditional E-value: 1.9e-24 CBM13.hmm 10 vnvnsgkcl.ggst.aagan.vqlwdccnganQqWtltsdgtirlenhq.sgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyy 96 +vn kc+ ++s+ +a+ n + ++dc+ + +QqW++++ + ++ + g cLd ++++ta+g+ v+ y+cng+++QqW + + g+ AUG80461.1|CBM13 1309 SGVNGAKCIdDQSGlTANVNpIEVYDCNASPAQQWSMDPRN----NSLHvMGGCLDDTNGATASGSLVNYYSCNGTPAQQWLRQAD--GS- 1392 456799***866667666666*****654677******988....34443455***558899*******************99666..55. PP CBM13.hmm 97 kirnrasgkcLdvkgg..adgtpvqqwdcngganQqWsvlk 135 i +kcLd ++ ++ t++q+++cng++ QqW+v+ AUG80461.1|CBM13 1393 -IYLPFADKCLDDPNAnvTNLTRLQLYTCNGSPAQQWTVTP 1432 .6665558******756666799**************9875 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1435 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 136.41 // Query: QES16580.1|CBM13 [L=1436] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-28 85.5 0.8 1e-27 83.8 0.8 1.9 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 83.8 0.8 1e-27 1e-27 11 129 .. 1317 1428 .. 1309 1431 .. 0.83 Alignments for each domain: == domain 1 score: 83.8 bits; conditional E-value: 1e-27 CBM13.hmm 11 nvnsgkcl...ggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdva.asstaagaevqqytcngganQqWrlesvgsgyyk 97 +++sg cl gg +++g +vq+++c+++ +Q W+ +dg+++++ h c d+ + s ++g+++q+++cng+anQ+W + + + QES16580.1|CBM13 1317 DQASGSCLdlsGGVAEQGRPVQMYACNGTPAQMWKGMPDGSLQIKGH----CFDAPgNTSLGNGTPLQIWPCNGSANQKWLFRAD----GS 1399 456*****764444478878*****776677*********8888777....***87555555********************877....56 PP CBM13.hmm 98 irnrasgkcLdvkggadgtpvqqwdcngganQ 129 + n asg+cLd+ g g+++ +wdcn++ Q QES16580.1|CBM13 1400 VYNPASGRCLDAPG---GNTLYLWDCNQTRPQ 1428 99***********6...899*******96656 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1436 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 187.56 // Query: CCA53931.1|CBM13 [L=1436] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.2e-28 85.4 0.8 1e-27 83.8 0.8 1.9 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 83.8 0.8 1e-27 1e-27 11 129 .. 1317 1428 .. 1309 1431 .. 0.83 Alignments for each domain: == domain 1 score: 83.8 bits; conditional E-value: 1e-27 CBM13.hmm 11 nvnsgkcl...ggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdva.asstaagaevqqytcngganQqWrlesvgsgyyk 97 +++sg cl gg +++g +vq+++c+++ +Q W+ +dg+++++ h c d+ + s ++g+++q+++cng+anQ+W + + + CCA53931.1|CBM13 1317 DQASGSCLdlsGGVAEQGRPVQMYACNGTPAQMWKGMPDGSLQIKGH----CFDAPgNTSLGNGTPLQIWPCNGSANQKWLFRAD----GS 1399 456*****764444478878*****776677*********8888777....***87555555********************877....56 PP CBM13.hmm 98 irnrasgkcLdvkggadgtpvqqwdcngganQ 129 + n asg+cLd+ g g+++ +wdcn++ Q CCA53931.1|CBM13 1400 VYNPASGRCLDAPG---GNTLYLWDCNQTRPQ 1428 99***********6...899*******96656 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1436 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 212.92 // Query: AUG78680.1|CBM13 [L=1439] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.5e-32 99.6 9.1 1.5e-32 99.6 9.1 3.3 3 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.1 0.0 0.012 0.012 68 111 .. 96 141 .. 78 159 .. 0.73 2 ? -4.8 1.1 1 1 123 145 .. 558 580 .. 555 600 .. 0.54 3 ! 99.6 9.1 1.5e-32 1.5e-32 10 134 .. 1314 1436 .. 1309 1439 .] 0.83 Alignments for each domain: == domain 1 score: 2.1 bits; conditional E-value: 0.012 CBM13.hmm 68 aagaevqqytcngganQqW..rlesvgsgyykirnrasgkcLdvkg 111 +++ ++qq t+ +ga+Q +l ++++g+++ + +asg++L g AUG78680.1|CBM13 96 QTQHPLQQRTRKNGAWQDLdaTLATTADGTVTPKTAASGLALSGGG 141 467899999*999999976223334459999999999999987654 PP == domain 2 score: -4.8 bits; conditional E-value: 1 CBM13.hmm 123 cngganQqWsvlksdlkikliae 145 cn+++ W +l+sd+ + ++++ AUG78680.1|CBM13 558 CNTNDLSTWGWLNSDTASLNVNV 580 55555555555555544444333 PP == domain 3 score: 99.6 bits; conditional E-value: 1.5e-32 CBM13.hmm 10 vnvn.sgkcl.ggst..aaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdva.asstaagaevqqytcngganQqWrlesvgsgy 95 +n+ ++cl ++++ ++g++vq+wdc+++a QqWt +dg++++ cLd ++s a+g+ q++tcng+a+Q+W + AUG78680.1|CBM13 1314 TNGVaANRCLdDSQGalTDGNAVQIWDCNGSAPQQWTAMPDGSLQVLG----HCLDDPqGNS-ASGTVTQLWTCNGSAAQKWLPRAD---- 1395 454449****644447889989*****766566*********666544....4***544555.9******************99777.... PP CBM13.hmm 96 ykirnrasgkcLdvkgg..adgtpvqqwdcngganQqWsvl 134 + i+n a+gkcLd +g ++gt+ q+wdcng++ QqW+++ AUG78680.1|CBM13 1396 GSIVNSATGKCLDMPQGnvTSGTRPQLWDCNGTPAQQWTFT 1436 67***999*******667999*****************997 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1439 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 145.43 // Query: AZM93769.1|CBM13 [L=1395] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.2e-28 86.8 7.2 1.2e-28 86.8 7.2 2.2 2 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -4.3 0.8 1 1 121 137 .. 338 354 .. 337 361 .. 0.70 2 ! 86.8 7.2 1.2e-28 1.2e-28 9 134 .. 1266 1385 .. 1260 1390 .. 0.82 Alignments for each domain: == domain 1 score: -4.3 bits; conditional E-value: 1 CBM13.hmm 121 wdcngganQqWsvlksd 137 w+ +++ Q+W++ +++ AZM93769.1|CBM13 338 WQPTNRGTQHWAWVQEA 354 77777777888877665 PP == domain 2 score: 86.8 bits; conditional E-value: 1.2e-28 CBM13.hmm 9 lvnvn.sgkcl.ggst...aaganvqlwdccngan.QqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgs 93 lv++ + kc + +t a+g+ +q+wdc++ +n Qq++++ +g++r+ gkc+d +++ g+ vq++tcng++ QqW + + AZM93769.1|CBM13 1266 LVSGVsDAKCAdD-NTggtADGNRIQIWDCNG-SNpQQFEIRENGEVRI----LGKCVD----AANHGTLVQLWTCNGTGPQQWLPQAD-- 1344 555554899**62.4435577778*****666.888*********7775....468***....4579************99*****777.. PP CBM13.hmm 94 gyykirnrasgkcLdvkgg..adgtpvqqwdcngganQqWsvl 134 + + n ++++c+d+ +g ++g ++q+w+cng++ Q+W + AZM93769.1|CBM13 1345 --GSLYNPMNNRCMDLPQGrtDNGVQLQLWECNGTNPQRWLTT 1385 ..56*************999777***********999***765 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1395 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 167.32 // Query: QIY98783.1|CBM13 [L=1419] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.2e-28 86.0 4.2 8e-28 84.1 4.2 2.0 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 84.1 4.2 8e-28 8e-28 9 137 .. 1006 1132 .. 1001 1140 .. 0.84 Alignments for each domain: == domain 1 score: 84.1 bits; conditional E-value: 8e-28 CBM13.hmm 9 lvnvnsgkcl...ggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyy 96 l vn+++cl g+ ta+g++ q+++c+++++Q++tl +d+t h gkcLdv+ + t++g++vq+y+cn++++Q W ++ ++ QIY98783.1|CBM13 1006 LDTVNKNLCLdiaGSRTANGTAAQMYTCNDSDAQNFTLGTDHT----VHALGKCLDVTKGDTDNGTPVQLYQCNNTGSQEWVPGPY---QG 1089 567889****997777799999*****776566******9983....334589****966679********************988...59 PP CBM13.hmm 97 kirnrasgkcLdvkgg.ad.gtpvqqwdcngganQqWsvlksd 137 +++n +sg+cL + + t+v++wdc + a Q+W+ ++ + QIY98783.1|CBM13 1090 TLKNPQSGRCLADPASnRNpRTRVVIWDCKNIADQKWAATEGN 1132 9**********9996565547**********777***998876 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1419 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 210.55 // Query: AWZ03336.1|CBM13 [L=1387] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.4e-24 71.0 3.2 3.2e-23 69.1 3.2 2.0 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 69.1 3.2 3.2e-23 3.2e-23 14 138 .. 1259 1380 .. 1247 1385 .. 0.85 Alignments for each domain: == domain 1 score: 69.1 bits; conditional E-value: 3.2e-23 CBM13.hmm 14 sgkcl...ggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyykirnr 101 + c+ +++ta+g+ + +w c+++ +Qq+ ++++g+i + +g+c++++++ ta+g++v+ +c g + QqW + +++ n AWZ03336.1|CBM13 1259 PDICMdapNNNTADGQRLAIWGCNGSPAQQFDINANGSIAI----NGQCVSANGNQTASGTPVVFSSCKGEGGQQWLPRAD----GTLYNP 1341 57799877777788888*****776677*********7665....345***998888***********999*******888....78**** PP CBM13.hmm 102 asgkcLdvkgg.ad.gtpvqqwdcngganQqWsvlksdl 138 +s +cLd + + gt++ + +cng++ Q+Ws+ ++++ AWZ03336.1|CBM13 1342 QSSMCLDDPWAsQTwGTTLMLVTCNGTPAQRWSIPTVTM 1380 *******997765579****************9877665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1387 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 211.00 // Query: AWZ11124.1|CBM13 [L=1387] Scores for complete sequence (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Model Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.4e-24 71.0 3.2 3.2e-23 69.1 3.2 2.0 1 CBM13.hmm Domain annotation for each model (and alignments): >> CBM13.hmm # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 69.1 3.2 3.2e-23 3.2e-23 14 138 .. 1259 1380 .. 1247 1385 .. 0.85 Alignments for each domain: == domain 1 score: 69.1 bits; conditional E-value: 3.2e-23 CBM13.hmm 14 sgkcl...ggstaaganvqlwdccnganQqWtltsdgtirlenhqsgkcLdvaasstaagaevqqytcngganQqWrlesvgsgyykirnr 101 + c+ +++ta+g+ + +w c+++ +Qq+ ++++g+i + +g+c++++++ ta+g++v+ +c g + QqW + +++ n AWZ11124.1|CBM13 1259 PDICMdapNNNTADGQRLAIWGCNGSPAQQFDINANGSIAI----NGQCVSANGNQTASGTPVVFSSCKGEGGQQWLPRAD----GTLYNP 1341 57799877777788888*****776677*********7665....345***998888***********999*******888....78**** PP CBM13.hmm 102 asgkcLdvkgg.ad.gtpvqqwdcngganQqWsvlksdl 138 +s +cLd + + gt++ + +cng++ Q+Ws+ ++++ AWZ11124.1|CBM13 1342 QSSMCLDDPWAsQTwGTTLMLVTCNGTPAQRWSIPTVTM 1380 *******997765579****************9877665 PP Internal pipeline statistics summary: ------------------------------------- Query sequence(s): 1 (1387 residues searched) Target model(s): 1 (188 nodes) Passed MSV filter: 1 (1); expected 0.0 (0.02) Passed bias filter: 1 (1); expected 0.0 (0.02) Passed Vit filter: 1 (1); expected 0.0 (0.001) Passed Fwd filter: 1 (1); expected 0.0 (1e-05) Initial search space (Z): 1 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00 # Mc/sec: 209.32 // [ok]